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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS00490 and PFLU_RS00495 are separated by 72 nucleotides
PFLU_RS00495 and PFLU_RS00500 are separated by 57 nucleotides
PFLU_RS00500 and PFLU_RS00505 are separated by 403 nucleotides
PFLU_RS00505 and PFLU_RS00510 are separated by 68 nucleotides
PFLU_RS00490: PFLU_RS00490 - DUF2914 domain-containing protein, at 99,302 to 100,333
_RS00490
PFLU_RS00495: PFLU_RS00495 - insulinase family protein, at 100,406 to 101,788
_RS00495
PFLU_RS00500: PFLU_RS00500 - Na/Pi cotransporter family protein, at 101,846 to 103,504
_RS00500
PFLU_RS00505: PFLU_RS00505 - TerC family protein, at 103,908 to 104,675
_RS00505
PFLU_RS00510: PFLU_RS00510 - CitMHS family transporter, at 104,744 to 106,051
_RS00510
Group
Condition
PFLU
_RS00490
PFLU
_RS00495
PFLU
_RS00500
PFLU
_RS00505
PFLU
_RS00510
pH
Growth at pH8 and (C) Trisodium citrate
-0.3
-0.8
-0.3
-0.5
-3.2
pH
Growth at pH9 and (C) Trisodium citrate
-0.1
+0.1
-0.5
-0.6
-3.1
pH
Growth at pH9 and (C) Trisodium citrate
+0.5
-0.3
-0.2
-0.4
-3.5
carbon source
Trisodium citrate 10 mM (C)
+0.0
-0.1
+0.1
-0.9
-2.6
pH
Growth at pH6 and (C) Trisodium citrate
+0.1
-0.1
-0.1
-1.4
-1.8
carbon source
Trisodium citrate 10 mM (C)
-0.0
-0.2
+0.2
-0.4
-2.7
pH
Growth at pH6 and (C) Trisodium citrate
+0.3
-0.2
-0.2
-1.2
-1.8
carbon source
Trisodium citrate (C)
-0.0
-0.3
-0.3
-0.5
-1.9
pH
Growth at pH6 and (C) Trisodium citrate
+0.1
-0.2
-0.0
-1.2
-1.7
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.1
-0.6
-2.2
carbon source
Trisodium citrate (C)
+0.2
-0.1
-0.5
-0.6
-1.8
carbon source
Trisodium citrate 10 mM (C)
-0.3
-0.1
+0.1
-0.7
-1.8
pH
Growth at pH6 and (C) Trisodium citrate
+0.4
-0.1
-0.0
-1.2
-1.6
pH
Growth at pH6 and (C) Trisodium citrate
+0.2
+0.2
-0.0
-1.2
-1.7
pH
Growth at pH6 and (C) Trisodium citrate
+0.3
+0.2
-0.0
-1.3
-1.6
pH
Growth at pH7 and (C) Trisodium citrate
+0.1
-0.1
-0.1
-0.3
-1.9
pH
Growth at pH7 and (C) Trisodium citrate
+0.2
-0.4
-0.0
-0.3
-1.7
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.2
-0.1
-0.3
-1.6
carbon source
Trisodium citrate (C)
+0.3
-0.1
-0.1
+0.1
-2.3
carbon source
Trisodium citrate (C)
-0.1
+0.0
+0.1
-0.0
-2.0
pH
Growth at pH8 and (C) Trisodium citrate
+0.2
-0.1
-0.0
+0.1
-2.1
pH
Growth at pH7 and (C) Trisodium citrate
+0.2
-0.0
+0.1
-0.5
-1.7
carbon source
Trisodium citrate (C)
+0.2
+0.2
-0.1
+0.1
-2.3
pH
Growth at pH7 and (C) Trisodium citrate
+0.1
-0.3
+0.1
+0.1
-1.8
carbon source
propionate 20 mM (C)
+0.5
-0.6
-0.3
-0.8
-0.3
carbon source
Trisodium citrate (C); with MOPS
+0.6
-0.1
-0.1
-0.5
-1.4
pH
Growth at pH8 and (C) Trisodium citrate
+0.3
+0.1
-0.0
+0.3
-2.0
pH
Growth at pH7 and (C) Trisodium citrate
+0.3
+0.2
-0.1
+0.2
-1.8
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.3
+0.3
+0.4
-1.1
-0.1
carbon source
Phloretic Acid 2 mM (C)
+0.8
-0.7
+0.2
-0.5
+0.1
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