Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS00465 and PFLU_RS00470 are separated by 92 nucleotidesPFLU_RS00470 and PFLU_RS00475 overlap by 4 nucleotidesPFLU_RS00475 and PFLU_RS00480 are separated by 1 nucleotidesPFLU_RS00480 and PFLU_RS00485 overlap by 4 nucleotides PFLU_RS00465: PFLU_RS00465 - spore maturation protein, at 94,430 to 95,659 _RS00465 PFLU_RS00470: PFLU_RS00470 - hypothetical protein, at 95,752 to 96,363 _RS00470 PFLU_RS00475: PFLU_RS00475 - MCE family protein, at 96,360 to 97,298 _RS00475 PFLU_RS00480: PFLU_RS00480 - ATP-binding cassette domain-containing protein, at 97,300 to 98,103 _RS00480 PFLU_RS00485: PFLU_RS00485 - ABC transporter permease, at 98,100 to 99,248 _RS00485
Group Condition PFLU_RS00465 PFLU_RS00470 PFLU_RS00475 PFLU_RS00480 PFLU_RS00485
carbon source acetate 30 mM (C) -4.1 -0.2 -0.7 -0.3 -0.2
carbon source acetate 30 mM (C) -3.7 -0.0 -0.5 -0.0 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.3 -0.7 +0.0 -0.2 -0.2
carbon source butyrate 20 mM (C) -2.3 -0.4 -0.4 +0.1 -0.1
carbon source acetate 30 mM (C) -3.4 +0.5 -0.1 -0.2 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.9 -0.2 -0.2 -0.1 -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.7 +0.1 +0.5 +0.2 +0.0
stress L-Glutamine (C)(N); with TAPS; with chloride -0.7 -0.4 -2.1 -0.0 +0.4
carbon source L-Arabinose (C); with MOPS -2.1 -0.0 -0.7 +0.1 +0.3
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -2.3 +0.0 -0.3 +0.1 +0.1
carbon source propionate 20 mM (C) -2.8 +0.1 +0.2 +0.2 -0.0
carbon source L-Arabinose (C); with MOPS -2.2 +0.5 -0.7 -0.1 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 +0.3 +0.5 +0.1 -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 +0.5 -0.3 +0.4 +0.1
carbon source butyrate 20 mM (C) -1.8 -0.1 +0.2 +0.4 -0.4
carbon source L-Arabinose (C) -1.9 +0.1 +0.5 -0.1 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 +0.6 -0.6 +0.4 +0.1
carbon source propionate (C) -0.9 +0.6 +0.2 +0.1 +1.0
no stress control Glycine betaine (C)(N); with MOPS +1.5 -0.1 -0.6 -0.2 +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.1 +0.1 -1.0 +0.1 +0.8
carbon source D-Glucose (C) 3 mM +2.3 -0.1 -0.1 +0.0 -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.4 +0.4 +0.8 +0.4 +0.9
carbon source p-Coumaric 2 mM (C) +0.6 +0.3 +1.1 +0.7 -0.1
carbon source L-Valine (C) +1.2 -0.1 +0.7 +0.2 +0.7
carbon source D-Mannitol (C) +0.9 +0.4 +0.5 +0.5 +0.6
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +2.3 +0.2 +0.1 +0.1 +0.2
carbon source Inosine (C) +1.5 +0.6 +0.9 +0.1 -0.2
carbon source p-Coumaric (C) +0.8 +0.6 +0.5 +0.5 +0.6
carbon source Vanillic Acid (C) +1.3 +0.7 +0.4 +0.1 +0.8
carbon source Inosine (C) +1.5 +0.9 +0.2 +0.4 +1.0
remove
PFLU_RS00465
plot		 remove
PFLU_RS00470
plot		 remove
PFLU_RS00475		 remove
PFLU_RS00480
plot		 remove
PFLU_RS00485
plot