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Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS00275 and PFLU_RS00280 are separated by 85 nucleotides
PFLU_RS00280 and PFLU_RS00285 are separated by 68 nucleotides
PFLU_RS00285 and PFLU_RS00290 are separated by 368 nucleotides
PFLU_RS00290 and PFLU_RS00295 are separated by 58 nucleotides
PFLU_RS00275: PFLU_RS00275 - carbonic anhydrase, at 55,747 to 56,478
_RS00275
PFLU_RS00280: PFLU_RS00280 - SulP family inorganic anion transporter, at 56,564 to 58,111
_RS00280
PFLU_RS00285: PFLU_RS00285 - hypothetical protein, at 58,180 to 58,827
_RS00285
PFLU_RS00290: PFLU_RS00290 - cytochrome c oxidase subunit II, at 59,196 to 60,323
_RS00290
PFLU_RS00295: PFLU_RS00295 - cytochrome c oxidase subunit I, at 60,382 to 61,968
_RS00295
Group
Condition
PFLU
_RS00275
PFLU
_RS00280
PFLU
_RS00285
PFLU
_RS00290
PFLU
_RS00295
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-4.2
-0.1
+0.5
-2.0
-1.9
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-4.8
+0.1
+0.2
-1.7
-1.5
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-4.4
-0.1
+0.6
-1.9
-1.7
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
-0.2
-0.0
+0.5
-2.7
-3.2
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
-0.4
-0.1
+0.5
-2.8
-2.8
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-4.8
+0.0
+0.3
-0.3
-0.3
carbon source
Phloretic Acid 2 mM (C)
-4.0
-0.0
-0.1
-0.7
+0.4
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-3.6
+0.0
+0.3
-0.6
-0.5
carbon source
4-Hydroxyphenylpropionic (C) 1.5 mM
-4.8
-0.1
-0.1
+0.3
+0.4
carbon source
4-Hydroxyphenylpropionic (C) 1.5 mM
-4.9
-0.1
-0.1
+0.5
+0.4
carbon source
acetate 30 mM (C)
-3.9
+0.0
-0.5
-0.0
+0.2
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-4.0
-0.2
+0.4
-0.2
-0.1
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
+0.2
-0.1
+0.8
-2.6
-2.4
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
+0.1
-0.1
+0.8
-2.2
-2.4
carbon source
Phloretic Acid 2 mM (C)
-3.7
+0.0
-0.1
+0.1
-0.2
carbon source
4-hydroxyphenylacetic 2 mM (C)
-3.9
-0.2
+0.1
+0.1
+0.2
carbon source
Phloretic Acid 2 mM (C)
-4.1
+0.0
+0.2
-0.0
+0.3
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-3.9
-0.1
+0.3
-0.1
+0.1
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-3.9
-0.1
+0.3
-0.0
+0.2
carbon source
acetate 30 mM (C)
-3.5
-0.1
-0.3
+0.2
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 1.5 mM
-4.8
-0.1
-0.1
+0.7
+0.8
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-4.1
+0.0
+0.2
+0.1
+0.3
carbon source
4-Hydroxyphenylpropionic (C) 5 mM
-3.4
-0.0
+0.2
-0.2
+0.0
carbon source
4-Hydroxyphenylpropionic (C) 1.5 mM
-4.8
-0.0
+0.0
+0.8
+0.8
carbon source
p-Coumaric (C) 2.5 mM
-3.3
-0.1
+0.3
+0.1
+0.2
carbon source
p-Coumaric (C) 5 mM
-3.9
+0.1
+0.8
+0.2
+0.2
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-3.4
-0.0
+0.4
+0.2
+0.3
carbon source
p-Coumaric (C) 5 mM
-3.9
+0.1
+0.9
+0.2
+0.1
carbon source
p-Coumaric (C) 5 mM
-3.7
+0.1
+0.8
+0.2
+0.2
carbon source
p-Coumaric (C) 5 mM
-3.5
-0.0
+0.7
+0.3
+0.2
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