Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS00250 and PFLU_RS00255 are separated by 273 nucleotidesPFLU_RS00255 and PFLU_RS00260 are separated by 2 nucleotidesPFLU_RS00260 and PFLU_RS00265 are separated by 12 nucleotidesPFLU_RS00265 and PFLU_RS00270 are separated by 81 nucleotides PFLU_RS00250: PFLU_RS00250 - protein-tyrosine-phosphatase, at 49,599 to 50,255 _RS00250 PFLU_RS00255: PFLU_RS00255 - gluconate 2-dehydrogenase subunit 3 family protein, at 50,529 to 51,281 _RS00255 PFLU_RS00260: PFLU_RS00260 - GMC family oxidoreductase, at 51,284 to 53,068 _RS00260 PFLU_RS00265: PFLU_RS00265 - cytochrome c, at 53,081 to 54,379 _RS00265 PFLU_RS00270: PFLU_RS00270 - PA0069 family radical SAM protein, at 54,461 to 55,519 _RS00270
Group Condition PFLU_RS00250 PFLU_RS00255 PFLU_RS00260 PFLU_RS00265 PFLU_RS00270
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -0.1 -0.2 -0.1 -0.8
carbon source Quinic Acid (C) -0.8 +0.0 -0.1 -0.2 -0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 -0.0 -0.1 -0.2 -0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -0.2 -0.2 -0.1 -0.4
carbon source NAG (C) -0.7 +0.0 -0.1 -0.2 -0.0
carbon source Inosine (C) -0.5 -0.1 -0.3 -0.0 -0.1
carbon source Shikimic Acid (C) -0.3 -0.2 -0.4 -0.1 +0.2
carbon source Xanthosine (C) -0.6 -0.4 -0.0 +0.1 +0.0
carbon source L-Valine 10 mM (C) +0.2 -0.5 -0.2 -0.1 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 +0.1 +0.1 -0.1 -0.6
carbon source propionate 20 mM (C) +0.1 -0.2 -0.2 -0.2 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -0.1 -0.1 -0.1 -0.5
carbon source Ferulic Acid 2 mM (C) -0.4 -0.3 -0.1 -0.0 +0.1
pH Growth at pH8 and (C) Trisodium citrate -0.2 -0.4 -0.3 -0.1 +0.4
carbon source p-Coumaric 2 mM (C) -0.3 -0.3 +0.1 -0.1 +0.2
pH Growth at pH7 and (C) D-Glucose -0.4 +0.4 -0.0 -0.0 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 +0.2 +0.2 +0.3 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 +0.3 +0.2 -0.1 -0.1
carbon source Ferulic Acid (C) 1.5 mM -0.0 -0.4 +0.0 -0.1 +0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.6 -0.0 -0.2 -0.1 +0.0
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.1 +0.1 +0.2 +0.3 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 +0.2 +0.2 +0.0 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 +0.6 -0.0 +0.1 -0.0
stress Betaine (C)(N); with MOPS; with chloride +0.2 +0.2 -0.0 -0.1 +0.3
stress Betaine (C)(N); with MOPS; with chloride +0.5 +0.1 +0.1 -0.0 +0.2
carbon source Ferulic Acid (C) 1.5 mM +0.3 -0.2 +0.0 +0.1 +0.9
carbon source p-Coumaric (C) 5 mM -0.0 -0.2 +0.1 -0.1 +1.8
carbon source p-Coumaric (C) 5 mM -0.2 -0.0 +0.1 -0.1 +1.9
carbon source p-Coumaric (C) 5 mM -0.0 +0.1 +0.0 -0.1 +1.7
carbon source p-Coumaric (C) 5 mM +0.2 +0.1 +0.0 +0.0 +1.8
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