Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_04748	MPMX20_04749	MPMX20_04750	MPMX20_04751	MPMX20_04752
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.0	-0.3	-1.3	-0.1	+0.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.2	-0.4	-0.0	-0.4
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.1	-0.2	-1.2	-0.0	+0.1
mixed community	TSB plate, 1:1 coculture with Enterobacter ludwigii PH2	+0.1	-0.6	-0.4	+0.1	-0.3
mixed community	0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2	-0.0	-0.4	-0.5	-0.1	+0.0
mixed community	TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.3	-0.4	-0.3	+0.1
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	+0.1	-0.5	-0.1	-0.2	-0.2
mixed community	M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.4	-0.4	-0.1	+0.1
mixed community	1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039	+0.1	-0.4	-0.4	-0.1	+0.0
mixed community	AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001	+0.0	-0.4	-0.2	+0.1	-0.3
carbon source	Carnitine Hydrochloride (C)	-0.1	-0.7	-0.2	+0.1	+0.1
mixed community	1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037	+0.2	-0.5	-0.2	-0.1	-0.1
mixed community	0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-0.9	-0.3	+0.0	+0.3
carbon source	Fumarate (C)	-0.1	-0.3	-0.5	+0.0	+0.1
mixed community	M9 plate, 1:1 coculture with Brevibacillus agri TBS_043	+0.2	-0.3	-0.4	-0.1	-0.2
mixed community	M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2	+0.1	-0.6	-0.2	-0.1	+0.2
mixed community	M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-0.5	-0.2	-0.1	+0.1
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	+0.2	+0.3	-0.9	-0.2	+0.2
mixed community	1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1	+0.3	-0.4	-0.4	+0.0	+0.2
mixed community	0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-0.4	-0.3	+0.0	+0.1
mixed community	M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	-0.3	-0.4	+0.0	+0.4
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.2	-0.7	-0.3	-0.1	+0.7
mixed community	TSB plate, 1:1 coculture with AMD2732	-0.0	-0.4	-0.3	+0.0	+0.3
mixed community	0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.0	-0.4	-0.2	+0.1	+0.2
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	-0.4	-0.1	-0.0	+0.4
mixed community	TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.1	+0.2	-0.3	-0.2	+0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	+0.1	-0.3	-0.0	+0.5
mixed community	0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.2	-0.3	-0.1	-0.0	+0.5
mixed community	1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.0	+0.5	-0.2	-0.2	+0.3
mixed community	M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.0	+0.2	-0.5	+0.1	+0.5