Fitness for 5 genes in Enterobacter sp. TBS_079

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX20_04727 and MPMX20_04728 overlap by 4 nucleotidesMPMX20_04728 and MPMX20_04729 are separated by 43 nucleotidesMPMX20_04729 and MPMX20_04730 are separated by 69 nucleotidesMPMX20_04730 and MPMX20_04731 are separated by 52 nucleotides MPMX20_04727: MPMX20_04727 - hypothetical protein, at 75,652 to 76,380 _04727 MPMX20_04728: MPMX20_04728 - Protein PsiB, at 76,377 to 76,808 _04728 MPMX20_04729: MPMX20_04729 - Nucleoid occlusion protein, at 76,852 to 78,849 _04729 MPMX20_04730: MPMX20_04730 - hypothetical protein, at 78,919 to 79,161 _04730 MPMX20_04731: MPMX20_04731 - Plasmid-derived single-stranded DNA-binding protein, at 79,214 to 79,771 _04731
Group Condition MPMX20_04727 MPMX20_04728 MPMX20_04729 MPMX20_04730 MPMX20_04731
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.8 -0.2 -3.5 -1.9
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -0.3 -0.3 -3.5 -2.0
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.3 -0.4 -3.6 -2.2
mixed community TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.4 -0.4 -3.3 -2.0
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.0 -0.6 -3.3 -2.2
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.7 -0.4 -2.5 -2.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.1 -0.7 -3.1 -1.9
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.0 -0.4 -2.6 -2.4
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.2 -0.4 -2.7 -2.2
mixed community 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.0 -0.4 -3.1 -2.1
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.1 -0.0 -3.3 -1.9
mixed community 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.0 -0.3 -2.6 -2.4
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.2 -0.2 -3.2 -2.0
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.1 +0.3 -3.4 -1.9
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.2 -0.5 -2.8 -1.9
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 -0.1 -0.4 -2.6 -2.4
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.2 -0.2 -2.7 -2.1
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 +0.1 +0.5 -3.0 -1.9
mixed community 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.5 -0.6 -2.6 -1.9
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.0 +0.6 -3.0 -1.8
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 -0.3 -0.1 -3.2 -1.6
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 -0.5 -0.6 -2.7 -1.4
mixed community 1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.1 +0.6 -3.1 -1.7
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 +0.6 +0.1 -3.0 -1.2
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.5 +0.3 -2.1 -2.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.2 -0.0 +3.5 -1.7 -0.8
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.5 +0.3 +3.8 -1.6 -1.1
nitrogen source L-Lysine (N) +0.3 +0.1 +2.6 +1.8 +0.9
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 +0.3 +0.5 +3.6 +2.9 -0.6
nitrogen source Cytosine (N) +0.2 +0.2 +3.3 +1.9 +1.2
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