Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_04503 and MPMX20_04504 are separated by 27 nucleotidesMPMX20_04504 and MPMX20_04505 are separated by 118 nucleotidesMPMX20_04505 and MPMX20_04506 are separated by 97 nucleotidesMPMX20_04506 and MPMX20_04507 are separated by 53 nucleotides MPMX20_04503: MPMX20_04503 - Competence protein ComM, at 4,711,560 to 4,713,080 _04503 MPMX20_04504: MPMX20_04504 - hypothetical protein, at 4,713,108 to 4,713,446 _04504 MPMX20_04505: MPMX20_04505 - HTH-type transcriptional regulator HdfR, at 4,713,565 to 4,714,386 _04505 MPMX20_04506: MPMX20_04506 - tRNA-Trp, at 4,714,484 to 4,714,559 _04506 MPMX20_04507: MPMX20_04507 - tRNA-Asp, at 4,714,613 to 4,714,689 _04507
Group Condition MPMX20_04503 MPMX20_04504 MPMX20_04505 MPMX20_04506 MPMX20_04507
nitrogen source D-Alanine (N) -0.4 -2.1 -1.7 N.D. N.D.
nitrogen source Glycine (N) -0.1 -1.8 -2.2 N.D. N.D.
carbon source octanoate (C) -0.1 -3.9 -0.0 N.D. N.D.
nitrogen source L-Arginine (N) -0.0 -2.4 -1.5 N.D. N.D.
nitrogen source L-Isoleucine (N) -0.1 -2.7 -0.9 N.D. N.D.
nitrogen source L-Alanine (N) -0.3 -1.7 -1.6 N.D. N.D.
carbon source L-Glutamine (C) +0.3 -2.6 -1.3 N.D. N.D.
nitrogen source Beta-Lactose (N) +0.0 -2.7 -0.8 N.D. N.D.
nitrogen source Adenosine (N) -0.1 -2.6 -0.6 N.D. N.D.
nitrogen source NAG (N) -0.0 -2.2 -1.1 N.D. N.D.
mixed community LB agar plate coculture with Mixed culture; Streptomyces ambofaciens SAI_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct -0.1 -2.2 -0.7 N.D. N.D.
nitrogen source L-Methionine (N) -0.2 -1.5 -1.2 N.D. N.D.
nitrogen source Cytidine (N) -0.2 -1.8 -0.9 N.D. N.D.
nitrogen source Parabanic Acid (N) -0.0 -2.1 -0.7 N.D. N.D.
nitrogen source Adenine (N) -0.2 -1.7 -0.9 N.D. N.D.
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.01 -0.1 -1.8 -0.9 N.D. N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 -1.4 -1.1 N.D. N.D.
nitrogen source Gly-Glu (N) +0.1 -1.3 -1.2 N.D. N.D.
carbon source D-Lactate (C) +0.3 -2.1 -0.6 N.D. N.D.
nitrogen source L-Citrulline (N) +0.3 -1.3 -1.2 N.D. N.D.
mixed community M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b +0.2 +2.2 -0.5 N.D. N.D.
carbon source L-Malic (C) +0.2 +1.9 +0.5 N.D. N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.1 +1.7 +1.0 N.D. N.D.
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.2 +2.7 +0.1 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +2.4 +0.7 N.D. N.D.
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +0.4 +1.6 +1.2 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +2.0 +1.8 N.D. N.D.
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +5.6 +4.9 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 +0.2 +5.4 +5.1 N.D. N.D.
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.8 +6.6 +6.3 N.D. N.D.
remove
MPMX20_04503
plot		 remove
MPMX20_04504
plot		 remove
MPMX20_04505		 remove
MPMX20_04506
plot		 remove
MPMX20_04507
plot