Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04342 and MPMX20_04343 overlap by 17 nucleotidesMPMX20_04343 and MPMX20_04344 are separated by 47 nucleotidesMPMX20_04344 and MPMX20_04345 are separated by 129 nucleotidesMPMX20_04345 and MPMX20_04346 are separated by 76 nucleotides MPMX20_04342: MPMX20_04342 - Ribosomal RNA small subunit methyltransferase D, at 4,537,545 to 4,538,147 _04342 MPMX20_04343: MPMX20_04343 - hypothetical protein, at 4,538,131 to 4,538,412 _04343 MPMX20_04344: MPMX20_04344 - hypothetical protein, at 4,538,460 to 4,538,819 _04344 MPMX20_04345: MPMX20_04345 - hypothetical protein, at 4,538,949 to 4,539,575 _04345 MPMX20_04346: MPMX20_04346 - Zinc/cadmium/lead-transporting P-type ATPase, at 4,539,652 to 4,541,838 _04346
Group Condition MPMX20_04342 MPMX20_04343 MPMX20_04344 MPMX20_04345 MPMX20_04346
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -0.2 -0.6 -6.1 +0.3 -0.2
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB +0.2 -0.9 -2.4 +0.1 -2.8
carbon source Carnitine Hydrochloride (C) +0.2 -0.7 -4.7 +0.1 -0.4
carbon source L-Sorbose (C) -0.5 +0.2 -4.6 -0.2 -0.3
nitrogen source Gelatin (N) -0.3 -0.6 -4.3 +0.4 -0.2
nitrogen source D-Salicin (N) +0.2 +0.4 -4.3 -0.4 -0.2
nitrogen source L-Threonine (N) -0.1 -0.4 -3.2 -0.3 -0.1
carbon source Glycine (C) +0.3 +0.1 -4.5 -0.0 -0.0
carbon source L-Isoleucine (C) +0.1 -0.1 -4.6 +0.3 +0.1
supernatant mutant library grown in Supernatant; Enterobacter sp. TBS_079 grown in LB -0.4 -0.1 -1.3 +0.2 -2.4
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +0.5 -0.6 -3.3 +0.0 -0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 -0.8 -2.2 -0.4 -0.1
carbon source octanoate (C) -0.7 +0.7 -3.7 +0.0 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.5 -0.8 -1.5 -0.3 -0.5
carbon source D-Alanine (C) -0.6 -0.1 -2.6 +0.2 -0.2
carbon source Thymine (C) -0.2 -1.0 -2.1 +0.3 +0.0
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 -1.1 -1.6 +0.5 +0.1
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -0.2 -0.2 -2.9 +0.2 +0.4
nitrogen source L-Methionine (N) +0.2 -0.3 -2.7 -0.0 +0.3
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB +0.3 +0.1 -1.0 +0.4 -2.3
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.5 +1.2 -0.9 -1.1 -0.0
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.1 +1.3 -2.7 +0.2 +0.3
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 -0.9 +0.1 +1.4 +0.3
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.9 -0.7 +1.9 +0.6 -0.3
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.5 +2.0 -1.3 +1.0 -0.3
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +0.2 -0.4 +2.4 -0.0
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.5 +2.5 -1.0 +0.0
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.2 +3.0 -0.3 +0.4
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.0 +0.8 +2.9 -0.6 +0.0
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.2 +0.6 +4.6 -0.2 +0.1
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