Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04328 and MPMX20_04329 are separated by 73 nucleotidesMPMX20_04329 and MPMX20_04330 are separated by 227 nucleotidesMPMX20_04330 and MPMX20_04331 are separated by 1 nucleotidesMPMX20_04331 and MPMX20_04332 overlap by 4 nucleotides MPMX20_04328: MPMX20_04328 - sn-glycerol-3-phosphate transport system permease protein UgpA, at 4,522,184 to 4,523,071 _04328 MPMX20_04329: MPMX20_04329 - sn-glycerol-3-phosphate-binding periplasmic protein UgpB, at 4,523,145 to 4,524,461 _04329 MPMX20_04330: MPMX20_04330 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 4,524,689 to 4,525,402 _04330 MPMX20_04331: MPMX20_04331 - Lipopolysaccharide export system ATP-binding protein LptB, at 4,525,404 to 4,526,171 _04331 MPMX20_04332: MPMX20_04332 - hypothetical protein, at 4,526,168 to 4,527,445 _04332
Group Condition MPMX20_04328 MPMX20_04329 MPMX20_04330 MPMX20_04331 MPMX20_04332
carbon source L-Proline (C) -0.2 +0.0 -1.8 -1.5 -1.5
nitrogen source Gelatin (N) -0.3 -0.2 -1.8 +0.1 -0.2
nitrogen source L-Threonine (N) -0.0 +0.1 -0.7 -0.8 -0.8
carbon source L-Asparagine (C) +0.1 +0.0 -0.6 -0.3 -1.1
carbon source Gly-Glu (C) +0.1 -0.1 -0.8 -0.6 -0.7
carbon source L-Glutamic (C) -0.2 +0.3 -0.7 -0.6 -0.7
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.5 -0.1 -0.3 -0.7 -0.3
nitrogen source Uridine (N) -0.1 -0.2 -1.1 -0.2 -0.3
carbon source L-Arginine (C) -0.2 +0.2 -0.5 -0.7 -0.6
nitrogen source L-Lysine (N) -0.0 +0.0 -0.7 -0.6 -0.6
mixed community 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.3 -0.4 -0.7 -0.3 +0.0
mixed community 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 +0.0 -0.2 -0.6 -0.6 -0.2
carbon source L-Citrulline (C) -0.2 +0.3 -1.3 -0.1 -0.3
carbon source L-Threonine (C) +0.1 +0.1 -0.6 -0.3 -0.7
carbon source L-Aspartic Acid (C) -0.0 +0.3 -0.6 -0.2 -0.7
carbon source Gly-DL-Asp (C) +0.3 +0.2 -0.4 -0.3 -0.4
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.0 -0.1 -0.7 -0.4 +0.7
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +0.3 -0.4 +0.1 +0.3
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.2 +0.8 -0.2 -0.2
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.3 -0.2 +0.8 -0.6 -0.1
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 +0.4 +0.4 -0.5 +0.2 -0.3
carbon source Glycerol (C) +0.0 +0.4 +0.3 +1.0 -0.2
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.0 +1.1 +0.9 +0.0
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.2 +1.1 +0.6 +0.1
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.4 +0.2 +0.3 +0.5
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.4 +1.1 +0.1 +0.5
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +0.0 +0.5 +0.4 +0.3
carbon source octanoate (C) +0.5 +0.8 +0.3 +0.8 -0.1
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 +0.6 +0.1 +0.5 +0.3
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.1 +0.7 +1.3 +1.1
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