Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04313 and MPMX20_04314 overlap by 4 nucleotidesMPMX20_04314 and MPMX20_04315 are separated by 230 nucleotidesMPMX20_04315 and MPMX20_04316 are separated by 177 nucleotidesMPMX20_04316 and MPMX20_04317 are separated by 50 nucleotides MPMX20_04313: MPMX20_04313 - Glycogen debranching enzyme, at 4,505,189 to 4,507,162 _04313 MPMX20_04314: MPMX20_04314 - 1,4-alpha-glucan branching enzyme GlgB, at 4,507,159 to 4,509,345 _04314 MPMX20_04315: MPMX20_04315 - Aspartate-semialdehyde dehydrogenase, at 4,509,576 to 4,510,679 _04315 MPMX20_04316: MPMX20_04316 - hypothetical protein, at 4,510,857 to 4,511,450 _04316 MPMX20_04317: MPMX20_04317 - Low-affinity gluconate transporter, at 4,511,501 to 4,512,841 _04317
Group Condition MPMX20_04313 MPMX20_04314 MPMX20_04315 MPMX20_04316 MPMX20_04317
carbon source propionate (C) -0.0 -0.1 N.D. -2.7 +0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -1.2 -0.3 N.D. -0.9 +0.2
carbon source Ethanol (C) -0.3 -0.0 N.D. -1.6 -0.0
carbon source Glucuronamide (C) -0.3 -1.0 N.D. -1.0 +0.3
nitrogen source L-Lysine (N) -0.2 -0.1 N.D. -1.7 +0.1
carbon source L-Aspartic Acid (C) -0.4 -1.1 N.D. -0.4 +0.1
carbon source D-Lactate (C) -0.2 -0.8 N.D. -0.8 +0.3
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.6 -1.3 N.D. +0.3 +0.1
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.8 -1.0 N.D. +0.5 -0.1
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 -0.7 -1.1 N.D. +0.4 +0.1
carbon source Cytosine (C) +0.0 +0.1 N.D. -1.7 +0.4
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 -0.4 -1.4 N.D. +0.3 +0.4
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 -0.7 -1.0 N.D. +0.5 +0.2
mixed community TSB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 -0.4 -1.0 N.D. +0.5 +0.3
mixed community 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 -0.5 -0.9 N.D. +0.3 +0.5
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.5 -0.9 N.D. +0.9 -0.1
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -0.6 -0.7 N.D. +1.1 -0.3
mixed community TSB plate, 1:1 coculture with AMD2732 -0.5 -0.8 N.D. +0.7 +0.2
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.5 -0.7 N.D. +0.7 +0.2
mixed community M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030 -0.4 -1.0 N.D. +0.7 +0.4
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.6 -0.7 N.D. +0.5 +0.7
mixed community 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 -0.2 -0.9 N.D. +0.6 +0.4
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.5 -0.5 N.D. +0.7 +0.2
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.4 -0.9 N.D. +0.8 +0.6
mixed community 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 -0.2 -0.8 N.D. +0.6 +0.6
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.5 -0.5 N.D. +0.7 +0.5
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +0.2 -0.9 N.D. +0.8 +0.4
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 -0.6 N.D. +0.8 +0.6
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.5 +0.4 N.D. +0.7 +0.3
carbon source L-Glutamine (C) +1.1 +3.6 N.D. -0.3 +0.1
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