Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04278 and MPMX20_04279 are separated by 57 nucleotidesMPMX20_04279 and MPMX20_04280 are separated by 286 nucleotidesMPMX20_04280 and MPMX20_04281 are separated by 305 nucleotidesMPMX20_04281 and MPMX20_04282 are separated by 3 nucleotides MPMX20_04278: MPMX20_04278 - 3-dehydroquinate synthase, at 4,460,688 to 4,461,776 _04278 MPMX20_04279: MPMX20_04279 - Shikimate kinase 1, at 4,461,834 to 4,462,355 _04279 MPMX20_04280: MPMX20_04280 - Type IV pilus biogenesis and competence protein PilQ, at 4,462,642 to 4,463,880 _04280 MPMX20_04281: MPMX20_04281 - hypothetical protein, at 4,464,186 to 4,464,647 _04281 MPMX20_04282: MPMX20_04282 - hypothetical protein, at 4,464,651 to 4,465,145 _04282
Group Condition MPMX20_04278 MPMX20_04279 MPMX20_04280 MPMX20_04281 MPMX20_04282
carbon source L-Proline (C) -4.8 -5.2 +0.1 +0.2 -0.2
carbon source L-Histidine (C) -4.8 -4.7 +0.1 -0.1 +0.2
carbon source succinate (C) -4.6 -4.5 +0.1 +0.2 -0.2
carbon source L-Glutamine (C) -4.6 -4.3 +0.3 +0.1 -0.2
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -3.8 -4.2 -0.0 -0.1 -0.6
carbon source D-Glucose (C) -4.6 -4.1 +0.2 -0.1 +0.1
nitrogen source D-Serine (N) -3.6 -4.4 -0.0 -0.3 +0.0
carbon source D-Alanine (C) -4.7 -3.8 +0.1 -0.2 +0.3
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.01 -5.1 -2.6 -0.0 -0.2 -0.1
carbon source D-Glc (C) -4.8 -3.0 -0.1 -0.2 +0.0
carbon source L-Sorbose (C) -3.1 -4.6 +0.1 +0.1 -0.6
carbon source L-Asparagine (C) -4.6 -3.8 +0.2 +0.2 +0.1
carbon source L-Glutamine (C) -4.7 -3.2 +0.1 -0.1 +0.0
carbon source D-Glucuronic Acid (C) -4.5 -3.1 +0.2 -0.1 -0.3
carbon source D-Trehalose (C) -4.6 -3.3 +0.3 -0.1 -0.0
carbon source a-Cyclodextrin (C) -3.0 -4.6 +0.0 -0.5 +0.2
carbon source D,L-Malic Acid (C) -4.0 -4.1 -0.1 +0.3 +0.2
carbon source L-Glutamine (C) -4.7 -3.2 -0.1 +0.0 +0.2
carbon source Trisodium citrate (C) -4.2 -3.4 +0.2 -0.2 -0.0
carbon source L-Glutamic (C) -4.4 -4.0 +0.2 +0.3 +0.3
carbon source NAG (C) -4.6 -2.7 +0.1 +0.2 -0.5
carbon source L-Aspartic Acid (C) -4.7 -3.3 +0.1 -0.0 +0.4
nitrogen source L-Serine (N) -3.9 -3.3 +0.0 +0.3 -0.6
carbon source D-Serine (C) -4.3 -3.3 -0.0 +0.2 +0.3
carbon source D-Mannitol (C) -4.5 -3.2 +0.1 +0.2 +0.3
carbon source D-Maltose (C) -4.4 -2.6 +0.1 -0.3 +0.5
carbon source D-Galacturonic Acid (C) -4.6 -3.0 +0.0 +0.5 +0.5
nitrogen source Cytidine (N) -3.9 -3.4 +0.0 +0.0 +0.7
carbon source D-Glucose-6-Phosphate (C) -4.7 -2.4 +0.1 +0.2 +0.6
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.8 -4.1 -0.2 -0.5 +2.1
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