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Protein
Homologs
Fitness for 5 genes in
Enterobacter sp. TBS_079
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX20_04272 and MPMX20_04273 are separated by 100 nucleotides
MPMX20_04273 and MPMX20_04274 overlap by 8 nucleotides
MPMX20_04274 and MPMX20_04275 overlap by 8 nucleotides
MPMX20_04275 and MPMX20_04276 are separated by 41 nucleotides
MPMX20_04272: MPMX20_04272 - hypothetical protein, at 4,455,664 to 4,455,834
_04272
MPMX20_04273: MPMX20_04273 - Tryptophan--tRNA ligase, at 4,455,935 to 4,456,939
_04273
MPMX20_04274: MPMX20_04274 - Phosphoglycolate phosphatase, at 4,456,932 to 4,457,693
_04274
MPMX20_04275: MPMX20_04275 - Ribulose-phosphate 3-epimerase, at 4,457,686 to 4,458,363
_04275
MPMX20_04276: MPMX20_04276 - DNA adenine methylase, at 4,458,405 to 4,459,217
_04276
Group
Condition
MPMX20
_04272
MPMX20
_04273
MPMX20
_04274
MPMX20
_04275
MPMX20
_04276
mixed community
AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001
-3.4
-0.9
-1.1
-3.9
-3.4
mixed community
AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
-3.5
-0.7
+0.0
-3.8
-2.8
carbon source
L-Aspartic Acid (C)
-2.9
-0.4
-0.3
-3.1
-3.1
carbon source
Fumarate (C)
-0.3
-0.6
-0.3
-3.9
-3.9
carbon source
a-Ketoglutaric (C)
-1.7
-0.5
+0.3
-3.6
-3.2
mixed community
AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001
+0.4
-1.0
-0.4
-4.4
-3.4
mixed community
AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001
-2.5
-0.7
-0.5
-4.1
-0.9
mixed community
AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01
-1.2
-0.9
-0.5
-3.8
-2.4
motility; outer cut
Motility test in 1X LB; 1 day; outer cut; 0.3% agar
+0.2
-0.9
-0.5
-3.7
-3.7
mixed community
AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01
+0.6
-1.0
-0.2
-4.4
-3.3
carbon source
Putrescine (C)
-3.6
-0.1
+0.2
-2.1
-2.4
carbon source
m-Inositol (C)
-0.8
-0.3
+0.1
-3.8
-3.1
carbon source
succinate (C)
-1.2
-0.8
+0.1
-1.4
-4.7
nitrogen source
L-Phenylalanine (N)
-0.1
-1.1
+0.1
-2.9
-3.5
nitrogen source
D-Serine (N)
-1.5
-0.4
-0.2
-3.2
-2.1
carbon source
L-Citrulline (C)
-1.6
+0.0
+0.1
-3.4
-2.4
mixed community
AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01
+0.6
-0.7
-0.1
-4.6
-2.1
carbon source
D-Alanine (C)
+0.4
-0.1
+0.1
-3.9
-3.6
carbon source
D-Xylose (C)
-0.1
-0.5
+0.3
-3.8
-3.0
carbon source
L-Serine (C)
+0.6
-0.7
-0.4
-4.0
-2.4
carbon source
acetate (C)
+0.5
-0.7
-0.3
-3.1
-3.3
carbon source
L-Glutamic (C)
+0.5
-0.5
-0.1
-3.5
-3.1
mixed community
AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01
+1.8
-0.7
-0.1
-4.1
-3.2
mixed community
AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01
+1.2
-0.5
-0.1
-4.8
-1.7
nitrogen source
L-Methionine (N)
-0.8
+0.3
+0.4
-3.3
-2.4
carbon source
L-Proline (C)
-1.3
+0.4
+0.5
-3.6
-1.9
nitrogen source
L-Alanine (N)
+1.3
+0.2
+0.1
-3.5
-3.5
carbon source
Citric Acid (C)
+2.7
-0.3
+0.1
-2.4
-2.6
mixed community
0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
+5.8
-0.6
-0.2
-0.6
-0.8
nitrogen source
Adenine (N)
+1.0
-0.1
+0.1
+10.6
-0.2
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