Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_04227	MPMX20_04228	MPMX20_04229	MPMX20_04230	MPMX20_04231
nitrogen source	Inosine (N)	N.D.	N.D.	+0.3	-0.0	-5.2
carbon source	D-Arabinose (C)	N.D.	N.D.	+0.0	+0.6	-4.1
mixed community	AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001	N.D.	N.D.	+0.2	+0.2	-3.7
carbon source	Gly-DL-Asp (C)	N.D.	N.D.	+0.1	-0.0	-2.6
mixed community	0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4	N.D.	N.D.	-0.1	+0.2	-2.5
mixed community	1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031	N.D.	N.D.	-0.4	-0.3	-1.6
mixed community	0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.0	-0.3	-2.0
carbon source	oxalate (C)	N.D.	N.D.	-0.2	+0.4	-2.5
carbon source	a-Cyclodextrin (C)	N.D.	N.D.	+0.5	-0.1	-2.5
mixed community	M9 plate, 1:1 coculture with Agromyces sp. SAI_196	N.D.	N.D.	-0.4	+0.8	-2.4
carbon source	succinate (C)	N.D.	N.D.	+0.3	+0.2	-2.3
mixed community	AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01	N.D.	N.D.	+0.5	-0.6	-1.6
mixed community	M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090	N.D.	N.D.	-0.1	+0.6	-2.1
mixed community	AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001	N.D.	N.D.	+0.6	-0.1	-2.1
mixed community	M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b	N.D.	N.D.	-0.2	+1.0	-2.4
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	N.D.	N.D.	-0.4	+0.9	-1.5
mixed community	0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2	N.D.	N.D.	-0.0	+0.8	-1.8
mixed community	1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1	N.D.	N.D.	+0.5	+0.4	-1.5
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	N.D.	N.D.	-1.1	+0.1	+1.4
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	N.D.	N.D.	+0.7	+1.1	-0.6
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	N.D.	N.D.	-0.6	-0.1	+2.5
mixed community	1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b	N.D.	N.D.	-0.2	+0.5	+1.7
mixed community	1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2	N.D.	N.D.	+0.4	+2.3	-0.5
nitrogen source	D-Mannose (N)	N.D.	N.D.	+0.5	+0.4	+1.5
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+1.8	+0.1	+0.5
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+0.0	+0.1	+2.4
mixed community	TSB plate, 1:1 coculture with Paraburkholderia pittii CO4	N.D.	N.D.	+0.5	+1.3	+0.9
mixed community	AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001	N.D.	N.D.	+0.6	+0.8	+2.2
mixed community	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040	N.D.	N.D.	+0.8	-0.1	+3.7
mixed community	M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	+0.5	+0.6	+3.3