Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04194 and MPMX20_04195 are separated by 25 nucleotidesMPMX20_04195 and MPMX20_04196 are separated by 76 nucleotidesMPMX20_04196 and MPMX20_04197 are separated by 22 nucleotidesMPMX20_04197 and MPMX20_04198 are separated by 146 nucleotides MPMX20_04194: MPMX20_04194 - Peptide deformylase, at 4,396,394 to 4,396,903 _04194 MPMX20_04195: MPMX20_04195 - Methionyl-tRNA formyltransferase, at 4,396,929 to 4,397,876 _04195 MPMX20_04196: MPMX20_04196 - Ribosomal RNA small subunit methyltransferase B, at 4,397,953 to 4,399,215 _04196 MPMX20_04197: MPMX20_04197 - Trk system potassium uptake protein TrkA, at 4,399,238 to 4,400,614 _04197 MPMX20_04198: MPMX20_04198 - Large-conductance mechanosensitive channel, at 4,400,761 to 4,401,174 _04198
Group Condition MPMX20_04194 MPMX20_04195 MPMX20_04196 MPMX20_04197 MPMX20_04198
carbon source Carnitine Hydrochloride (C) -4.3 N.D. +0.0 -3.2 -0.1
carbon source L-Proline (C) -2.8 N.D. -0.7 -4.0 +0.1
carbon source D-Arabinose (C) -4.2 N.D. -0.5 -2.4 +0.0
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -4.0 N.D. -0.4 -2.7 +0.3
carbon source L-Fucose (C) -2.7 N.D. -0.5 -3.0 -0.0
carbon source D-Alanine (C) -2.1 N.D. -0.4 -3.7 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -3.4 N.D. -0.5 -1.9 -0.2
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 -3.6 N.D. -0.4 -1.6 +0.1
carbon source Cytidine (C) -2.1 N.D. -0.3 -3.1 -0.1
carbon source L-Histidine (C) -1.1 N.D. -0.4 -3.6 -0.0
nitrogen source Inosine (N) -4.1 N.D. +0.1 -1.2 +0.2
carbon source D-Lactate (C) -1.7 N.D. -1.0 -2.3 +0.1
carbon source Fumarate (C) -0.5 N.D. -0.8 -3.5 -0.1
carbon source L-Aspartic Acid (C) -1.1 N.D. -0.4 -3.5 -0.0
carbon source D-Maltose (C) -1.5 N.D. -0.1 -3.3 +0.0
carbon source L-Glutamic (C) -0.5 N.D. -0.5 -3.8 -0.0
carbon source Glucuronamide (C) -1.0 N.D. -0.7 -3.2 +0.1
carbon source succinate (C) -0.3 N.D. -0.6 -3.7 -0.2
carbon source butyrate (C) -1.2 N.D. -0.6 -2.7 -0.2
carbon source Trisodium citrate (C) -0.9 N.D. -0.3 -3.5 -0.0
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -0.9 N.D. -0.6 -3.0 -0.0
carbon source L-Lactate (C) -1.0 N.D. -0.7 -3.1 +0.2
carbon source Tween 20 (C) -0.9 N.D. -0.2 -3.6 +0.1
nitrogen source octanoate (N) -4.1 N.D. +0.2 -1.0 +0.3
carbon source D,L-Malic Acid (C) -1.5 N.D. +0.1 -3.1 -0.0
carbon source Cytosine (C) -2.0 N.D. +0.4 -2.8 -0.1
carbon source L-Valine (C) -1.8 N.D. -0.0 -2.8 +0.3
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -2.4 N.D. +0.1 -2.1 +0.1
nitrogen source L-Histidine (N) -3.1 N.D. +0.4 -0.9 +0.6
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +5.4 N.D. -0.6 -0.9 +0.4
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