Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_04134	MPMX20_04135	MPMX20_04136	MPMX20_04137	MPMX20_04138
carbon source	Fumarate (C)	N.D.	N.D.	-2.8	-3.4	+0.2
carbon source	succinate (C)	N.D.	N.D.	-4.2	-1.6	+0.1
mixed community	TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b	N.D.	N.D.	-1.3	-2.6	-0.8
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	N.D.	N.D.	-1.4	-2.0	-0.9
mixed community	0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.5	-2.6	-0.2
mixed community	TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031	N.D.	N.D.	-1.8	-1.8	-0.4
supernatant	mutant library grown in Supernatant; Pseudomonas frederiksbergensis TBS_004 grown in LB	N.D.	N.D.	-0.7	-3.2	-0.1
mixed community	Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5	N.D.	N.D.	-0.7	-3.2	-0.1
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	N.D.	N.D.	-1.2	-2.2	-0.5
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1	N.D.	N.D.	-0.7	-2.2	-0.9
mixed community	1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.0	-2.3	-0.4
mixed community	0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031	N.D.	N.D.	-1.1	-1.9	-0.6
mixed community	0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4	N.D.	N.D.	-1.0	-2.3	-0.3
mixed community	M9 plate, 1:1 coculture with Brevibacillus agri TBS_043	N.D.	N.D.	-0.6	-2.4	-0.6
mixed community	0.1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.6	-2.4	-0.6
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	N.D.	N.D.	-1.0	-2.5	-0.0
mixed community	0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.6	-1.2	-0.6
mixed community	0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_030	N.D.	N.D.	-1.1	-2.0	-0.3
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.2	-2.0	-0.2
carbon source	Adenine (C)	N.D.	N.D.	-0.4	-3.2	+0.2
mixed community	M9 plate, 1:1 coculture with Bacillus megaterium TBS_037	N.D.	N.D.	-0.9	-1.9	-0.6
mixed community	0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-0.7	-2.2	-0.4
mixed community	0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.0	-1.8	-0.5
carbon source	L-Glutamic (C)	N.D.	N.D.	-1.0	-2.4	+0.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.2	-1.5	-0.5
motility; outer cut	Motility test in 1X LB; 1 day; outer cut; 0.3% agar	N.D.	N.D.	-0.9	-2.1	-0.3
carbon source	a-Ketoglutaric (C)	N.D.	N.D.	-1.8	-1.3	+0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	N.D.	-1.2	-1.8	+0.3
carbon source	acetate (C)	N.D.	N.D.	-3.0	+0.1	+0.2
carbon source	D-Galacturonic Acid (C)	N.D.	N.D.	-0.7	-2.3	+0.3