Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_04114	MPMX20_04115	MPMX20_04116	MPMX20_04117	MPMX20_04118
mixed community	AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001	-0.2	-3.2	N.D.	N.D.	-0.3
mixed community	AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001	+0.0	-2.4	N.D.	N.D.	-0.3
carbon source	L-Proline (C)	+0.1	-0.7	N.D.	N.D.	-1.9
mixed community	AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01	-0.3	-2.1	N.D.	N.D.	-0.1
mixed community	AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01	+0.0	-2.0	N.D.	N.D.	-0.1
mixed community	LB agar plate coculture with Mixed culture; Pseudomonas plecoglossicida TBS_049 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct	-0.3	-1.3	N.D.	N.D.	-0.4
carbon source	L-Cysteine (C)	-0.1	-1.8	N.D.	N.D.	-0.0
mixed community	AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001	+0.4	-2.1	N.D.	N.D.	-0.2
mixed community	M9 plate, 1:1 coculture with Agromyces sp. SAI_196	-1.2	+0.8	N.D.	N.D.	-1.1
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	+0.3	-1.7	N.D.	N.D.	+0.2
mixed community	AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01	+0.7	-1.8	N.D.	N.D.	-0.0
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-0.5	+0.6	N.D.	N.D.	-1.1
mixed community	TSB plate, 1:1 coculture with Bacillus megaterium TBS_037	-0.6	+0.8	N.D.	N.D.	-0.9
mixed community	M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027	-0.6	+0.9	N.D.	N.D.	-0.8
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	+0.4	-1.5	N.D.	N.D.	+1.1
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1	-0.3	+1.0	N.D.	N.D.	-0.6
mixed community	M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030	+0.1	+1.0	N.D.	N.D.	-0.9
mixed community	1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2	-0.4	+1.2	N.D.	N.D.	-0.4
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	+0.2	+1.0	N.D.	N.D.	-0.8
mixed community	M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2	+0.2	+1.1	N.D.	N.D.	-0.7
mixed community	0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.0	+1.2	N.D.	N.D.	-0.6
mixed community	1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030	-0.2	+1.2	N.D.	N.D.	-0.4
mixed community	0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4	-0.3	+1.4	N.D.	N.D.	-0.4
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+1.1	+0.5	N.D.	N.D.	-0.9
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.6	+0.8	N.D.	N.D.	-0.5
carbon source	D-Lactate (C)	+0.8	+1.0	N.D.	N.D.	-0.7
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	+0.1	+1.5	N.D.	N.D.	-0.4
mixed community	M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+1.4	+0.2	N.D.	N.D.	-0.4
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.3	+0.6	N.D.	N.D.	+1.5
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.0	+1.1	N.D.	N.D.	+1.7