Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_04095	MPMX20_04096	MPMX20_04097	MPMX20_04098	MPMX20_04099
mixed community	0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196	N.D.	-0.6	-0.8	-1.0	-1.9
mixed community	M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2	N.D.	-1.1	-0.3	-0.8	-1.7
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	-0.3	-0.9	-0.2	-2.0
mixed community	M9 plate, 1:1 coculture with Brevibacillus agri TBS_043	N.D.	-0.1	-0.7	-1.3	-1.1
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	N.D.	-0.7	-1.4	+0.0	-0.9
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	N.D.	-1.0	-1.0	-0.6	-0.3
mixed community	TSB plate, 1:1 coculture with AMD2732	N.D.	-0.5	-0.5	-0.7	-1.1
mixed community	M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	-1.1	-0.3	-0.3	-0.9
mixed community	M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031	N.D.	+0.2	-1.2	-1.0	-0.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	N.D.	-0.5	-0.7	-1.0	-0.4
mixed community	M9 plate, 1:1 coculture with Agromyces sp. SAI_196	N.D.	-0.1	-0.4	-0.9	-1.2
mixed community	M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027	N.D.	-0.7	-0.5	-0.7	-0.6
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	-0.6	-0.9	-0.1	-0.9
nitrogen source	octanoate (N)	N.D.	+0.3	+0.1	-1.5	-1.3
mixed community	LB agar plate coculture with Mixed culture; Streptomyces ambofaciens SAI_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct	N.D.	+0.1	-0.3	-0.6	-1.5
mixed community	0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	-1.3	-0.9	+0.2	-0.3
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	-1.3	-0.4	+0.2	-0.6
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	N.D.	-0.8	-0.8	-1.3	+0.7
mixed community	AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001	N.D.	-1.1	+0.4	-0.5	-0.8
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	N.D.	+0.7	-0.6	-0.9	-1.1
motility; outer cut	Motility test in 1X LB; 1 day; outer cut; 0.3% agar	N.D.	+0.5	-0.3	-0.8	-1.1
carbon source	L-Sorbose (C)	N.D.	+0.7	-0.8	-0.8	-0.6
mixed community	TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	N.D.	+0.7	-0.8	-0.6	-0.7
mixed community	AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001	N.D.	-0.6	-1.3	-0.0	+0.8
mixed community	TSB plate, 1:1 coculture with Rhizobium pusense TBS_045	N.D.	+0.9	-0.7	-0.6	-0.6
mixed community	0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090	N.D.	+1.0	+0.4	-0.4	-1.1
carbon source	L-Isoleucine (C)	N.D.	-0.8	+0.3	-0.5	+1.0
carbon source	octanoate (C)	N.D.	+0.8	+0.7	-0.8	-0.6
carbon source	Ethanol (C)	N.D.	+0.6	-0.9	+0.2	+1.4
carbon source	D-Lactate (C)	N.D.	+0.3	+1.1	+0.8	+0.4