Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_04061 and MPMX20_04062 are separated by 211 nucleotidesMPMX20_04062 and MPMX20_04063 are separated by 7 nucleotidesMPMX20_04063 and MPMX20_04064 are separated by 89 nucleotidesMPMX20_04064 and MPMX20_04065 are separated by 45 nucleotides MPMX20_04061: MPMX20_04061 - Ubiquinone biosynthesis accessory factor UbiJ, at 4,257,449 to 4,257,973 _04061 MPMX20_04062: MPMX20_04062 - putative protease YhbU, at 4,258,185 to 4,259,180 _04062 MPMX20_04063: MPMX20_04063 - hypothetical protein, at 4,259,188 to 4,260,066 _04063 MPMX20_04064: MPMX20_04064 - hypothetical protein, at 4,260,156 to 4,261,163 _04064 MPMX20_04065: MPMX20_04065 - Tryptophan-specific transport protein, at 4,261,209 to 4,262,453 _04065
Group Condition MPMX20_04061 MPMX20_04062 MPMX20_04063 MPMX20_04064 MPMX20_04065
nitrogen source D-Salicin (N) -0.1 -0.5 -0.0 -0.7 -0.9
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.1 -0.5 -0.8 -0.2 -0.5
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.1 -0.7 +0.0 +0.1 -1.2
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -0.3 -0.3 -0.2 -0.4
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.4 -0.2 -0.0 -0.8
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.3 -0.1 +0.1 -0.6
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.7 -0.2 +0.1 -0.2
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.1 -0.6 -0.1 +0.3 -0.7
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.2 -0.3 +0.3 -0.4
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.2 -0.4 +0.4 -0.4
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 +0.3 -0.3 -0.3 -0.5 -0.3
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -1.0 +0.3 -0.1 -0.1 -0.1
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -0.6 +0.0 +0.4 -0.6 -0.0
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.2 +0.2 +0.7 -0.5
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.6 -0.2 -0.3 +0.5
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.6 -0.5 +0.2 -0.2 -0.4
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 -0.3 -0.3 +0.4 -0.4
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.5 -0.4 +0.5 -0.1
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.5 +0.4 +0.4 -0.4 -0.5
mixed community TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.5 -0.1 +0.6 +0.0
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.5 +0.3 +0.1 -0.4
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 +0.4 +0.2 -0.2 +0.5 -0.2
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.3 +0.2 +0.4 +0.2
carbon source L-Arginine (C) +0.5 -0.1 -0.3 +0.4 +0.3
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.1 +0.6 +0.6 -0.4
mixed community 1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 -0.2 +0.5 +0.4 +0.4 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.4 +1.0 +0.7 +0.3
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.9 -0.5 -0.4 +0.7 +0.4
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.7 +0.5 +0.4 +0.1 -0.2
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.5 +0.5 +0.6 +0.0
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