Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_04058 and MPMX20_04059 are separated by 14 nucleotidesMPMX20_04059 and MPMX20_04060 overlap by 14 nucleotidesMPMX20_04060 and MPMX20_04061 overlap by 7 nucleotidesMPMX20_04061 and MPMX20_04062 are separated by 211 nucleotides MPMX20_04058: MPMX20_04058 - hypothetical protein, at 4,256,187 to 4,256,621 _04058 MPMX20_04059: MPMX20_04059 - hypothetical protein, at 4,256,636 to 4,256,965 _04059 MPMX20_04060: MPMX20_04060 - hypothetical protein, at 4,256,952 to 4,257,455 _04060 MPMX20_04061: MPMX20_04061 - Ubiquinone biosynthesis accessory factor UbiJ, at 4,257,449 to 4,257,973 _04061 MPMX20_04062: MPMX20_04062 - putative protease YhbU, at 4,258,185 to 4,259,180 _04062
Group Condition MPMX20_04058 MPMX20_04059 MPMX20_04060 MPMX20_04061 MPMX20_04062
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01 -2.3 -0.8 +0.3 +0.4 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.1 -0.8 +0.6 -0.4 -0.4
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -2.9 +0.5 +0.9 -0.6 +0.0
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -2.3 +0.5 +0.6 -0.4 -0.3
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -2.1 +0.0 +0.5 +0.9 -0.5
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.2 +0.6 +0.7 -0.4 -0.7
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +1.6 -0.7 -0.6 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -1.2 -0.5 +1.7 -1.0 +0.3
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 +0.3 +1.3 -1.6 -0.4 -0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -1.0 -0.3 +1.5 +0.1 -0.5
mixed community 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 -1.0 -0.7 +1.6 +0.4 -0.3
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -2.5 +0.8 +0.9 +0.8 +0.0
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -1.3 +1.2 +0.3 -0.3 +0.3
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 -1.0 +0.9 +0.4 +0.6 -0.5
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +1.7 +0.3 -0.4 -0.3
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -1.6 +0.5 +1.4 +0.5 -0.0
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +1.0 +1.2 -0.6 -0.6
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +0.7 +2.3 -0.4 -0.2
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.9 +0.8 +2.1 +0.0 +0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.8 +2.0 -0.1 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.5 +0.4 +2.2 +0.3 -0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.1 +2.5 +0.2 -0.6
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.4 +2.5 +0.4 -0.4
mixed community 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.9 +1.6 +0.7 -0.2
mixed community TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.2 -0.1 +2.6 +0.5 -0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.8 +2.5 -0.1 -0.2
mixed community TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.0 +0.5 +2.0 +0.5 +0.3
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +1.1 +2.9 +0.2 -0.1
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.3 +0.2 +2.4 +0.3 +0.5
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.4 +0.9 +2.0 +0.3 +0.2
remove
MPMX20_04058
plot		 remove
MPMX20_04059
plot		 remove
MPMX20_04060		 remove
MPMX20_04061
plot		 remove
MPMX20_04062
plot