Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03991 and MPMX20_03992 are separated by 215 nucleotidesMPMX20_03992 and MPMX20_03993 are separated by 33 nucleotidesMPMX20_03993 and MPMX20_03994 are separated by 160 nucleotidesMPMX20_03994 and MPMX20_03995 are separated by 61 nucleotides MPMX20_03991: MPMX20_03991 - Autoinducer 2 import ATP-binding protein LsrA, at 4,185,445 to 4,186,932 _03991 MPMX20_03992: MPMX20_03992 - Transcriptional regulator LsrR, at 4,187,148 to 4,188,119 _03992 MPMX20_03993: MPMX20_03993 - Autoinducer-2 kinase, at 4,188,153 to 4,189,733 _03993 MPMX20_03994: MPMX20_03994 - 2,4-dienoyl-CoA reductase, at 4,189,894 to 4,191,915 _03994 MPMX20_03995: MPMX20_03995 - Ribosomal RNA large subunit methyltransferase G, at 4,191,977 to 4,193,113 _03995
Group Condition MPMX20_03991 MPMX20_03992 MPMX20_03993 MPMX20_03994 MPMX20_03995
nitrogen source Inosine (N) -0.3 -1.1 -0.2 -0.1 -0.4
carbon source propionate (C) -0.4 -1.2 +0.3 -0.3 -0.4
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -0.8 +0.1 +0.2 -0.7
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.5 -0.7 +0.3 -0.0 -0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.0 -1.4 +0.3 +0.2 -0.1
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.7 -0.6 +0.6 -0.2 +0.1
mixed community M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.7 -0.2 +0.6 +0.2
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.1 +0.8 -0.4 -0.3 +0.1
mixed community 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.2 +0.2 +0.8 -0.1 -0.5
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.3 -0.3 +0.0 -0.5 +0.6
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 -0.5 +0.5 +0.3 -0.1
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.4 +0.4 -0.0 -0.6
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.7 +0.3 -0.1 -0.2
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +1.1 -0.2 +0.3 -0.0 -0.2
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.8 -0.5 +0.7 +0.4 -0.4
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 -0.2 +0.4 -0.2 +0.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +1.2 -0.1 +0.1 +0.1
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +1.0 -0.4 +0.1 +0.1 +0.1
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 +0.3 -0.4 +0.6 +0.0
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.6 +0.6 +0.3 -0.4
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.1 +0.5 +0.4 +0.4 +0.2
mixed community TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +1.0 +0.1 +0.3 -0.3
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 +0.2 +0.9 -0.1 +0.1 +0.4
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +1.1 -0.0 +0.1 +0.4 +0.0
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +1.3 +0.3 -0.3 +0.0 +0.3
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +1.0 +0.7 +0.1 -0.2
mixed community M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 +0.8 -0.0 +0.4 +0.3 +0.4
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 +0.9 +0.4 -0.1 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 +0.5 +0.7 +0.8 +0.3 -0.2
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +1.6 +0.0 -0.1 +0.2
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