Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03985 and MPMX20_03986 are separated by 38 nucleotidesMPMX20_03986 and MPMX20_03987 overlap by 4 nucleotidesMPMX20_03987 and MPMX20_03988 are separated by 11 nucleotidesMPMX20_03988 and MPMX20_03989 overlap by 4 nucleotides MPMX20_03985: MPMX20_03985 - 4-hydroxy-tetrahydrodipicolinate synthase, at 4,180,359 to 4,181,207 _03985 MPMX20_03986: MPMX20_03986 - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 4,181,246 to 4,181,539 _03986 MPMX20_03987: MPMX20_03987 - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 4,181,536 to 4,182,423 _03987 MPMX20_03988: MPMX20_03988 - Autoinducer 2-binding protein LsrB, at 4,182,435 to 4,183,436 _03988 MPMX20_03989: MPMX20_03989 - Autoinducer 2 import system permease protein LsrD, at 4,183,433 to 4,184,416 _03989
Group Condition MPMX20_03985 MPMX20_03986 MPMX20_03987 MPMX20_03988 MPMX20_03989
carbon source L-Glutamine (C) +0.3 -6.9 -1.1 -0.1 +0.1
carbon source L-Rhamnose (C) +0.0 -7.3 -0.3 -0.0 +0.2
carbon source Cytidine (C) -0.2 -7.4 +0.3 +0.1 -0.0
carbon source D-Ribose (C) +0.3 -7.2 +0.0 -0.3 -0.1
carbon source D-Galacturonic Acid (C) -0.1 -7.3 -0.0 +0.0 +0.1
carbon source L-Lactate (C) -0.1 -7.1 -0.1 +0.4 -0.3
carbon source L-Proline (C) +0.3 -6.5 -0.8 -0.2 +0.0
carbon source L-Aspartic Acid (C) +0.7 -7.4 -0.4 +0.1 -0.1
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.2 -6.8 -0.1 +0.0 -0.0
mixed community 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -1.0 -5.5 -0.4 -0.0 -0.1
carbon source D-Glucuronic Acid (C) +0.2 -7.4 +0.1 +0.0 +0.1
carbon source oxalate (C) -0.0 -6.9 +0.1 -0.1 +0.0
carbon source L-Glutamine (C) +0.0 -5.9 -1.4 +0.1 +0.1
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 -0.9 -4.9 -0.5 -0.1 -0.6
carbon source D-Xylose (C) +0.1 -7.4 +0.3 +0.1 +0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -5.8 -0.5 -0.2 -0.2
carbon source Ethanol (C) +0.4 -6.7 -0.5 +0.2 +0.0
carbon source L-Asparagine (C) +0.2 -6.4 -0.4 +0.3 -0.1
carbon source D-Xyl (C) +0.3 -7.0 +0.1 +0.1 +0.2
carbon source propionate (C) -0.1 -6.6 +0.3 -0.2 +0.3
carbon source L-Glutamine (C) -0.0 -5.8 -0.6 +0.2 -0.0
carbon source Beta-Lactose (C) +0.2 -6.0 -0.4 +0.3 +0.0
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -5.3 -0.7 +0.4 +0.2
carbon source Citric Acid (C) +0.4 -6.2 -0.0 +0.4 -0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -6.2 -0.3 +0.8 +0.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 -5.3 +0.5 +0.2 -0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -5.1 -0.7 -0.1 +0.1
carbon source D-Lactate (C) +0.2 -5.9 +0.4 +0.2 +0.2
mixed community 1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +1.0 -4.2 -0.5 -0.3 -0.5
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 +0.8 -4.5 +0.4 +0.4 -0.4
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