Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03868 and MPMX20_03869 are separated by 32 nucleotidesMPMX20_03869 and MPMX20_03870 are separated by 166 nucleotidesMPMX20_03870 and MPMX20_03871 are separated by 5 nucleotidesMPMX20_03871 and MPMX20_03872 overlap by 4 nucleotides MPMX20_03868: MPMX20_03868 - Raffinose permease, at 4,074,804 to 4,076,069 _03868 MPMX20_03869: MPMX20_03869 - hypothetical protein, at 4,076,102 to 4,077,916 _03869 MPMX20_03870: MPMX20_03870 - HTH-type transcriptional activator RhaS, at 4,078,083 to 4,078,922 _03870 MPMX20_03871: MPMX20_03871 - hypothetical protein, at 4,078,928 to 4,079,815 _03871 MPMX20_03872: MPMX20_03872 - Iron(3+)-hydroxamate-binding protein FhuD, at 4,079,812 to 4,080,765 _03872
Group Condition MPMX20_03868 MPMX20_03869 MPMX20_03870 MPMX20_03871 MPMX20_03872
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.2 -0.4 -0.1 -0.4 -0.1
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.0 -0.5 -0.2 -0.5
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.3 -0.4 -0.6 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.0 -0.6 +0.1 -0.8
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.1 -0.4 -0.5 -0.3 -0.0
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 -0.0 +0.4 -0.0 -0.4 -0.9
mixed community M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030 +0.1 -0.1 -0.5 +0.0 -0.3
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.0 -0.6 +0.2 -0.4
mixed community 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.2 -0.3 +0.1 -0.5
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.1 -0.4 -0.1 -0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.8 -0.1 +0.0 -0.1 +0.2
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.3 -0.2 -0.2 -0.4
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.4 -0.3 -0.3 -0.2
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.2 -0.3 +0.1 -0.4
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.0 -0.1 +0.4 -0.6
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 -0.1 +0.2 -0.6 -0.0 +0.4
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.1 +0.1 -0.7 +0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.9 -0.4 -0.3 -0.0
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.1 +0.6 -0.3 +0.2 -0.5
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.3 +0.4 -0.1 -0.1 -0.3
carbon source octanoate (C) +0.0 +0.2 +0.4 +0.5 -0.8
carbon source propionate (C) +0.1 -0.3 +0.5 +0.1 +0.4
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.1 +0.1 -0.5 -0.1 +1.2
mixed community 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.1 +0.1 +0.6 -0.2 +0.2
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.2 +0.3 -0.2 +0.4
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.1 +0.3 +0.3 +0.4
carbon source Trisodium citrate (C) -0.0 +0.4 +0.3 +0.1 +0.4
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.2 +0.1 -0.0 +0.9
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.1 +0.1 +0.1 +1.3
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.2 +0.1 +0.3 +1.6
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