Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_03760 and MPMX20_03761 are separated by 36 nucleotidesMPMX20_03761 and MPMX20_03762 are separated by 74 nucleotidesMPMX20_03762 and MPMX20_03763 are separated by 125 nucleotidesMPMX20_03763 and MPMX20_03764 are separated by 23 nucleotides MPMX20_03760: MPMX20_03760 - 6-phospho-beta-glucosidase BglA, at 3,960,972 to 3,962,405 _03760 MPMX20_03761: MPMX20_03761 - putative oxidoreductase YgfF, at 3,962,442 to 3,963,185 _03761 MPMX20_03762: MPMX20_03762 - Glycine dehydrogenase (decarboxylating), at 3,963,260 to 3,966,133 _03762 MPMX20_03763: MPMX20_03763 - Glycine cleavage system H protein, at 3,966,259 to 3,966,648 _03763 MPMX20_03764: MPMX20_03764 - Aminomethyltransferase, at 3,966,672 to 3,967,766 _03764
Group Condition MPMX20_03760 MPMX20_03761 MPMX20_03762 MPMX20_03763 MPMX20_03764
nitrogen source Glycine (N) +0.2 +0.1 -5.3 -4.9 -5.6
nitrogen source Gly-DL-Asp (N) +0.0 +0.0 -2.7 -3.5 -2.6
nitrogen source Gly-Glu (N) +0.1 +0.1 -2.8 -2.4 -2.4
carbon source Gly-Glu (C) +0.0 -0.1 -1.5 -1.7 -1.6
nitrogen source L-Threonine (N) +0.1 -0.2 -1.7 -1.3 -1.6
carbon source Glycine (C) -0.0 +0.3 -1.1 -2.2 -1.1
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.1 -0.8 -0.7 -1.6 -0.7
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.1 -0.3 -1.0 -1.6 -0.7
mixed community TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b +0.2 -0.2 -0.9 -1.4 -1.0
mixed community 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_030 +0.0 -0.4 -0.8 -1.4 -0.6
carbon source Gly-DL-Asp (C) -0.0 +0.1 -0.9 -1.3 -0.9
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.1 +0.2 -0.9 -1.0 -1.3
mixed community TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 -0.0 -0.3 -0.8 -0.8 -0.9
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 -0.3 -0.5 -0.7 -0.5 -0.8
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.1 -0.2 -0.1 -1.5 -1.0
mixed community 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 -0.1 -0.2 -0.6 -0.9 -0.9
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.1 +0.1 -1.0 -0.6 -1.0
mixed community TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 -0.1 -0.6 -0.2 -0.9 -0.7
supernatant mutant library grown in Supernatant; Pseudomonas frederiksbergensis TBS_004 grown in LB -0.1 -0.1 -0.9 -0.6 -0.8
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.4 -0.9 -0.4 -0.6
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.1 -0.4 -1.3 -0.8
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 +0.1 -0.3 -0.2 -1.2 -0.6
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.1 +0.2 -0.7 -1.4 -0.5
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.2 -0.8 -0.8 -0.6
mixed community Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048 -0.0 +0.3 -0.6 -1.5 -0.2
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.3 +0.8 +0.7 +1.1
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.0 -0.0 +3.1 +0.2
nitrogen source Putrescine (N) +0.2 +0.2 +1.2 +0.9 +0.8
carbon source Fumarate (C) +0.1 -0.1 +1.5 +1.6 +1.1
carbon source L-Serine (C) +0.0 -0.2 +3.0 +3.2 +2.6
remove
MPMX20_03760
plot
remove
MPMX20_03761
plot
remove
MPMX20_03762
remove
MPMX20_03763
plot
remove
MPMX20_03764
plot