Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03586 and MPMX20_03587 overlap by 4 nucleotidesMPMX20_03587 and MPMX20_03588 are separated by 12 nucleotidesMPMX20_03588 and MPMX20_03589 are separated by 15 nucleotidesMPMX20_03589 and MPMX20_03590 are separated by 61 nucleotides MPMX20_03586: MPMX20_03586 - PTS system glucitol/sorbitol-specific EIIC component, at 3,775,992 to 3,776,555 _03586 MPMX20_03587: MPMX20_03587 - PTS system glucitol/sorbitol-specific EIIB component, at 3,776,552 to 3,777,511 _03587 MPMX20_03588: MPMX20_03588 - PTS system glucitol/sorbitol-specific EIIA component, at 3,777,524 to 3,777,886 _03588 MPMX20_03589: MPMX20_03589 - Sorbitol-6-phosphate 2-dehydrogenase, at 3,777,902 to 3,778,681 _03589 MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102 _03590
Group Condition MPMX20_03586 MPMX20_03587 MPMX20_03588 MPMX20_03589 MPMX20_03590
carbon source D-Sorbitol (C) -0.8 -1.0 -1.3 -3.8 +0.0
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.0 -0.8 -0.1 -1.8
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.0 +0.3 -0.0 +0.3 -3.7
mixed community Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 +0.3 -0.1 -1.3 -0.1 -1.7
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -0.8 -0.1 -0.5 -0.3 -1.0
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 -0.0 +0.1 -0.5 -0.4 -1.7
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.3 -0.2 -0.2 -1.1
carbon source Adenine (C) +0.3 -0.2 +0.2 +0.0 -2.4
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.1 -0.4 +0.3 -1.3
carbon source L-Sorbose (C) -1.4 +0.2 +0.6 +0.2 -1.5
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.9 +0.2 -1.2 -0.7 -1.0
carbon source butyrate (C) +0.3 -0.2 -0.8 +0.3 -1.4
nitrogen source Cytidine (N) +0.1 -0.1 -0.5 +0.3 -1.4
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +0.1 -0.3 +0.6 -0.3 -1.1
mixed community 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.2 +0.5 +0.6 -1.2
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.4 -0.4 +0.4 +0.0 -1.2
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.7 +0.2 -0.7 -0.3 +1.3
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.3 +0.7 +0.2 -0.9
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +0.9 +0.4 +0.1 -0.4 -0.7
mixed community TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.3 +0.1 +0.2 +1.6
mixed community M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.1 -0.3 +0.4 -0.5 +1.8
mixed community M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030 +0.1 -0.3 -0.1 -0.1 +1.9
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.8 -0.1 -0.2 -0.3 +1.5
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.4 +0.2 +0.8 +1.6
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 +0.2 +1.2 +0.3 +0.7
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 -0.1 +1.0 +0.4 +0.5
carbon source L-Lactate (C) +0.2 -0.3 +0.2 +0.1 +2.1
mixed community TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 +0.1 -0.2 +2.1 +0.7 -0.1
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.2 +2.5 +0.4 +0.3
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.5 -0.1 +0.2 -0.0 +4.1
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