Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03386 and MPMX20_03387 are separated by 52 nucleotidesMPMX20_03387 and MPMX20_03388 are separated by 65 nucleotidesMPMX20_03388 and MPMX20_03389 are separated by 300 nucleotidesMPMX20_03389 and MPMX20_03390 are separated by 112 nucleotides MPMX20_03386: MPMX20_03386 - putative protein YfgJ, at 3,565,662 to 3,565,883 _03386 MPMX20_03387: MPMX20_03387 - hypothetical protein, at 3,565,936 to 3,566,970 _03387 MPMX20_03388: MPMX20_03388 - Di-/tripeptide transporter, at 3,567,036 to 3,568,577 _03388 MPMX20_03389: MPMX20_03389 - GTPase Der, at 3,568,878 to 3,570,350 _03389 MPMX20_03390: MPMX20_03390 - Outer membrane protein assembly factor BamB, at 3,570,463 to 3,571,641 _03390
Group Condition MPMX20_03386 MPMX20_03387 MPMX20_03388 MPMX20_03389 MPMX20_03390
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -2.9 -0.1 -0.1 N.D. -4.3
carbon source Carnitine Hydrochloride (C) -4.2 +0.5 -0.2 N.D. -3.2
carbon source Itaconic Acid (C) -4.2 -0.8 -0.2 N.D. -1.8
carbon source Adenine (C) -4.2 -0.9 +0.3 N.D. -1.7
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -2.8 -0.5 +0.2 N.D. -3.1
carbon source Thymine (C) -4.2 -0.5 -0.0 N.D. -1.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -1.0 -0.5 +0.1 N.D. -4.8
carbon source octanoate (C) -4.1 -0.1 -0.3 N.D. -1.6
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -2.3 -0.2 -0.3 N.D. -3.2
carbon source L-Threonine (C) -4.2 -0.6 -0.4 N.D. -0.8
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.8 -0.2 +0.7 N.D. -4.6
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.4 -0.2 +0.0 N.D. -4.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -3.1 +0.1 +0.3 N.D. -3.2
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -3.1 -0.1 -0.1 N.D. -2.2
mixed community Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048 -1.8 +0.2 -0.0 N.D. -3.7
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.3 +0.3 -0.1 N.D. -5.7
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.5 -0.3 N.D. -5.0
nitrogen source Uridine (N) -3.9 -0.3 +0.4 N.D. -1.0
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 +0.4 +0.1 N.D. -5.2
mixed community 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.5 +0.5 +0.2 N.D. -3.7
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 +0.3 +0.2 N.D. -5.6
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.2 +0.1 N.D. -4.8
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.7 +0.1 +0.0 N.D. -4.9
mixed community 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.5 +0.2 N.D. -4.5
mixed community Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 +0.8 -0.6 +0.3 N.D. -4.0
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.3 -0.5 -0.5 N.D. -3.4
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +1.2 -0.1 +0.6 N.D. -4.2
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +2.1 +0.4 +0.3 N.D. -4.1
mixed community 0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +2.5 -0.2 +0.7 N.D. -2.8
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +7.0 +0.4 -0.2 N.D. -1.5
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