Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_03357	MPMX20_03358	MPMX20_03359	MPMX20_03360	MPMX20_03361
mixed community	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040	-1.4	-0.1	-0.9	-0.4	+0.2
mixed community	M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090	-1.7	-0.1	-0.2	-0.2	+0.3
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	-0.9	-0.3	-0.5	-0.1	+0.0
carbon source	D-Lactate (C)	-1.7	+0.1	+0.1	-0.1	+0.1
mixed community	1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.7	+0.1	-0.1	-0.5	-0.3
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-1.0	+0.0	-0.4	-0.2	+0.1
nitrogen source	octanoate (N)	-0.6	+0.0	+0.1	-0.5	-0.5
mixed community	1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b	-1.2	-0.1	-0.5	+0.0	+0.5
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-0.5	+0.0	-0.5	-0.5	+0.2
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.1	+0.3	-0.4	-0.8	-0.2
mixed community	M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046	-0.5	-0.2	+0.4	-0.4	-0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.4	+0.1	+0.3	-0.8	-0.1
mixed community	1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039	-0.8	-0.0	-0.4	+0.5	-0.1
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.9	+0.1	+0.7	-0.3	-0.3
mixed community	1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021	-0.8	-0.1	-0.4	+0.7	-0.1
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-0.8	+0.4	-0.4	-0.3	+0.5
nitrogen source	D-Serine (N)	-0.9	+0.1	+0.3	-0.3	+0.2
mixed community	M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030	-0.9	-0.1	-0.1	+0.5	+0.1
carbon source	Beta-Lactose (C)	-1.1	+0.1	+0.1	+0.4	+0.1
mixed community	M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.0	+0.5	+0.2	-0.5	-0.5
mixed community	AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001	-0.9	-0.1	+0.6	-0.0	+0.2
mixed community	M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.5	+0.3	-0.1	-0.8	-0.1
mixed community	M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b	-0.9	+0.1	-0.3	+0.6	+0.4
mixed community	1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031	-0.3	+0.3	-0.5	+0.9	-0.3
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	-0.2	+0.2	-0.2	+1.0	-0.6
mixed community	TSB plate, 1:1 coculture with Paraburkholderia pittii CO4	+1.0	-0.1	+0.0	-0.5	-0.1
mixed community	M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010	-0.3	+0.2	-0.4	+0.9	-0.1
mixed community	M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031	-0.3	-0.1	-0.3	+1.3	-0.0
mixed community	TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.4	+0.3	+0.0	-0.5	+0.6
carbon source	Fumarate (C)	+1.9	-0.0	-0.4	-0.2	+0.0