Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_03297 and MPMX20_03298 are separated by 49 nucleotidesMPMX20_03298 and MPMX20_03299 are separated by 68 nucleotidesMPMX20_03299 and MPMX20_03300 are separated by 51 nucleotidesMPMX20_03300 and MPMX20_03301 are separated by 207 nucleotides MPMX20_03297: MPMX20_03297 - tRNA-Lys, at 3,466,944 to 3,467,019 _03297 MPMX20_03298: MPMX20_03298 - Hca operon transcriptional activator HcaR, at 3,467,069 to 3,467,956 _03298 MPMX20_03299: MPMX20_03299 - Xanthosine permease, at 3,468,025 to 3,469,281 _03299 MPMX20_03300: MPMX20_03300 - Purine nucleoside phosphorylase 2, at 3,469,333 to 3,470,157 _03300 MPMX20_03301: MPMX20_03301 - hypothetical protein, at 3,470,365 to 3,470,706 _03301
Group Condition MPMX20_03297 MPMX20_03298 MPMX20_03299 MPMX20_03300 MPMX20_03301
carbon source propionate (C) N.D. -0.1 -0.3 -0.2 -3.5
nitrogen source D-Mannose (N) N.D. -0.5 +0.2 -0.5 -3.0
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 N.D. +0.2 +0.1 -0.4 -3.3
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 N.D. +0.1 +0.4 +0.1 -3.5
mixed community TSB plate, 1:1 coculture with AMD2732 N.D. -0.2 -0.0 -0.5 -1.9
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 N.D. -0.2 -0.4 +0.1 -2.0
carbon source Xylitol (C) N.D. +0.0 +0.3 -0.1 -2.2
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.3 -0.4 -0.3 -1.3
mixed community M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 N.D. +0.3 -0.4 -0.3 -1.2
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.6 -0.2 +0.1 -1.9
mixed community 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.0 +0.5 +0.5 -2.4
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.0 +0.1 +0.2 -1.6
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.1 -0.3 +0.4 -1.5
mixed community 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 N.D. +0.1 +0.4 -0.1 -1.6
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. -0.0 +0.6 +0.0 -1.5
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 N.D. +0.4 +0.1 +0.1 -1.4
mixed community M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 N.D. +0.1 +0.2 +0.4 -1.3
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 N.D. +0.4 -0.0 +0.3 -1.3
mixed community 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 N.D. +0.3 +0.3 +0.3 -1.3
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 N.D. +0.5 +0.3 +0.3 -1.2
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. -0.6 +0.9 +1.0 -0.9
mixed community TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. -0.2 +0.8 +0.5 -0.5
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. -0.2 +0.4 +0.3 +1.1
nitrogen source L-Histidine (N) N.D. +0.4 +0.3 -0.3 +1.3
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.1 +0.2 -0.2 +1.8
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.2 +0.2 +0.3 +1.3
carbon source octanoate (C) N.D. +0.4 -0.1 +0.0 +1.8
carbon source Inosine (C) N.D. -0.1 +0.0 +1.6 +1.0
mixed community TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.8 +0.4 +1.1 +0.9
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct N.D. +0.6 +0.2 -0.2 +3.1
remove
MPMX20_03297
plot
remove
MPMX20_03298
plot
remove
MPMX20_03299
remove
MPMX20_03300
plot
remove
MPMX20_03301
plot