Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_03223 and MPMX20_03224 are separated by 11 nucleotidesMPMX20_03224 and MPMX20_03225 are separated by 92 nucleotidesMPMX20_03225 and MPMX20_03226 are separated by 337 nucleotidesMPMX20_03226 and MPMX20_03227 are separated by 76 nucleotides MPMX20_03223: MPMX20_03223 - Hexitol phosphatase A, at 3,396,400 to 3,397,059 _03223 MPMX20_03224: MPMX20_03224 - hypothetical protein, at 3,397,071 to 3,397,565 _03224 MPMX20_03225: MPMX20_03225 - hypothetical protein, at 3,397,658 to 3,398,113 _03225 MPMX20_03226: MPMX20_03226 - Acetate kinase, at 3,398,451 to 3,399,653 _03226 MPMX20_03227: MPMX20_03227 - Phosphate acetyltransferase, at 3,399,730 to 3,401,871 _03227
Group Condition MPMX20_03223 MPMX20_03224 MPMX20_03225 MPMX20_03226 MPMX20_03227
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 +0.7 +0.7 -0.6 -3.9 -3.5
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -0.1 -0.3 -0.3 -2.5 -3.0
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.2 -0.4 +0.3 -2.5 -3.2
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.1 +0.2 +0.2 -3.0 -2.9
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01 -0.0 -0.1 +0.1 -2.6 -2.7
carbon source D-Trehalose (C) +0.2 -0.1 -0.3 -2.7 -2.4
nitrogen source D-Serine (N) +0.3 -0.1 -1.0 -1.6 -2.7
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01 -0.1 -0.2 -0.2 -2.1 -2.2
carbon source Citric Acid (C) -0.2 -0.0 +0.0 -1.8 -2.7
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 -0.9 +0.5 -0.5 -2.1 -1.5
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01 -0.1 +0.1 -0.0 -2.0 -2.4
mixed community AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01 +0.2 +0.1 +0.1 -2.1 -2.8
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.5 +0.3 +0.1 -1.8 -2.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.9 -0.5 -0.2 -2.4 -2.2
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001 +0.3 +0.0 -0.2 -2.5 -1.9
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.3 +0.2 -0.2 -2.8 -1.6
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.2 +0.1 -1.0 -1.1 -1.8
carbon source D-Gluconic Acid (C) +0.1 +0.3 +0.0 -1.7 -2.6
carbon source D-Raffinose (C) +0.3 +0.0 -0.0 -2.2 -1.9
carbon source D-Serine (C) +0.0 +0.1 +0.5 -2.2 -2.4
carbon source D-Glucuronic Acid (C) +0.2 +0.0 -0.1 -2.3 -1.7
carbon source Parabanic Acid (C) -0.1 +0.5 -0.1 -2.3 -1.7
carbon source L-Malic (C) +0.2 -0.0 +0.4 -2.2 -2.0
carbon source D-Maltose (C) +0.1 +0.0 +0.4 -2.5 -1.4
carbon source Trisodium citrate (C) +0.4 -0.1 +0.0 -1.9 -1.9
carbon source D-Cellobiose (C) +0.2 +0.2 +0.2 -2.0 -1.9
carbon source D-Ribose (C) +0.3 -0.4 +0.6 -3.0 -0.6
carbon source acetate (C) +0.3 +0.0 +0.4 -2.2 -1.5
carbon source D-Glucosamine Hydrochloride (C) +0.5 -0.2 +0.2 -2.3 -1.1
carbon source D-Lactate (C) +0.6 -0.3 +0.5 +1.3 +1.8
remove
MPMX20_03223
plot		 remove
MPMX20_03224
plot		 remove
MPMX20_03225		 remove
MPMX20_03226
plot		 remove
MPMX20_03227
plot