Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03127 and MPMX20_03128 are separated by 171 nucleotidesMPMX20_03128 and MPMX20_03129 are separated by 99 nucleotidesMPMX20_03129 and MPMX20_03130 are separated by 64 nucleotidesMPMX20_03130 and MPMX20_03131 are separated by 47 nucleotides MPMX20_03127: MPMX20_03127 - Lysine-specific permease, at 3,285,428 to 3,286,897 _03127 MPMX20_03128: MPMX20_03128 - HTH-type transcriptional activator CmpR, at 3,287,069 to 3,287,935 _03128 MPMX20_03129: MPMX20_03129 - hypothetical protein, at 3,288,035 to 3,289,081 _03129 MPMX20_03130: MPMX20_03130 - Endonuclease 4, at 3,289,146 to 3,290,003 _03130 MPMX20_03131: MPMX20_03131 - PTS system fructose-specific EIIB'BC component, at 3,290,051 to 3,291,733 _03131
Group Condition MPMX20_03127 MPMX20_03128 MPMX20_03129 MPMX20_03130 MPMX20_03131
carbon source D-Fructose (C) +0.1 -0.8 -0.1 +0.1 -2.1
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -1.2 -0.3 -0.0 -0.4
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -1.6 +0.0 +0.1 -0.1
carbon source Sucrose (C) -0.1 -1.2 +0.0 +0.2 -0.2
carbon source L-Glutamine (C) +0.2 -1.2 +0.3 +0.0 -0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.2 -0.5 -0.8 +0.2 +0.2
mixed community M9 plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.8 +0.3 -0.4 +0.0
carbon source D-Salicin (C) +0.2 -0.9 +0.1 +0.2 -0.2
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -0.1 +0.5 +0.1 -0.6 -0.4
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 -1.2 +0.0 +0.5 -0.4
carbon source D-Glc (C) +0.3 -0.8 +0.2 -0.2 +0.1
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.8 +0.7 +0.1 +0.0
carbon source Cytidine (C) +0.1 -0.9 +0.1 +0.3 +0.2
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -1.0 +0.4 +0.1 +0.2
carbon source D-Maltose (C) +0.1 -0.8 -0.2 +0.3 +0.5
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.8 +0.3 -0.5 +0.5
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 -0.7 +0.1 +0.4 -0.2
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.4 +0.3 -0.6 +0.3 -0.2
carbon source D-Tagatose (C) +0.5 -0.3 -0.5 +0.2 +0.3
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.7 +1.0 +0.1 -0.2
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 -0.8 +0.6 -0.3 +0.4
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 +0.3 +0.4 -0.4 -0.3 +0.3
mixed community TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.3 +0.6 -0.3 +0.4
mixed community M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.2 +0.9 -0.5 +0.2 +0.0
carbon source D-Lactate (C) +0.3 -0.5 +0.3 +0.2 +0.6
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +0.2 +0.5 -0.5 +0.4 +0.3
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 +0.5 +0.3 -0.3 +0.2 +0.6
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.4 -0.1 +0.4 +0.6 +0.3
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.2 +0.5 +0.8 +0.1
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.8 +0.3 +0.9 +0.5
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