Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03115 and MPMX20_03116 are separated by 127 nucleotidesMPMX20_03116 and MPMX20_03117 are separated by 121 nucleotidesMPMX20_03117 and MPMX20_03118 are separated by 49 nucleotidesMPMX20_03118 and MPMX20_03119 are separated by 15 nucleotides MPMX20_03115: MPMX20_03115 - Cytidine deaminase, at 3,270,681 to 3,271,565 _03115 MPMX20_03116: MPMX20_03116 - hypothetical protein, at 3,271,693 to 3,272,412 _03116 MPMX20_03117: MPMX20_03117 - Gamma-glutamylputrescine synthetase PuuA, at 3,272,534 to 3,273,922 _03117 MPMX20_03118: MPMX20_03118 - Galactoside transport system permease protein MglC, at 3,273,972 to 3,274,982 _03118 MPMX20_03119: MPMX20_03119 - Galactose/methyl galactoside import ATP-binding protein MglA, at 3,274,998 to 3,276,518 _03119
Group Condition MPMX20_03115 MPMX20_03116 MPMX20_03117 MPMX20_03118 MPMX20_03119
carbon source Cytidine (C) -3.4 -0.5 -0.0 -0.0 -0.1
carbon source D-Galactose (C) -0.0 -0.6 +0.1 -1.3 -1.6
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.2 -2.0 +0.1 +0.3 -0.8
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.8 -0.4 -0.5 -0.2
carbon source octanoate (C) -0.4 -1.7 +0.2 -0.0 -0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.0 -2.2 +0.1 +0.5 -0.2
carbon source succinate (C) -0.2 -0.6 -0.1 -0.9 +0.0
carbon source Beta-Lactose (C) -0.1 -0.9 +0.1 -0.4 -0.6
carbon source D-Galacturonic Acid (C) +0.2 -0.7 -0.0 -0.4 -0.6
carbon source Adenine (C) -0.7 -0.8 +0.0 +0.3 -0.1
nitrogen source D-Serine (N) -0.1 -1.5 -0.1 +0.2 +0.0
carbon source Fumarate (C) -0.2 +0.0 +0.0 -1.5 +0.3
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -1.3 +0.3 +0.1 +0.0
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 -1.4 +0.3 +0.4 -0.3
carbon source Glucuronamide (C) -0.3 -0.9 +0.0 +0.2 -0.1
nitrogen source D-Salicin (N) -0.5 -0.5 +0.1 +0.2 -0.3
carbon source L-Histidine (C) -0.1 -1.0 +0.3 +0.1 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.3 -0.5 +0.1 +0.3
carbon source L-Fucose (C) -0.5 -0.4 +0.4 +0.3 -0.3
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.3 +0.6 -0.0 +0.1
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.4 -0.3 +0.5 +0.1
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 -0.1 -0.6 -0.1 +0.5 +0.3
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 -0.8 +0.3 -0.1 +0.0
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 -0.7 +0.2 -0.1 +0.3
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.7 +0.5 +0.1 -0.2 -0.1
carbon source Uridine (C) +2.4 -0.6 -0.5 +0.0 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 +0.7 +0.4 +0.3 +0.0
mixed community M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.4 +1.1 +0.2 -0.0 -0.1
mixed community TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 +0.5 +0.8 +0.2 +0.2 +0.1
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.1 +0.8 +0.8 +0.1
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