Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_03092 and MPMX20_03093 overlap by 7 nucleotidesMPMX20_03093 and MPMX20_03094 are separated by 211 nucleotidesMPMX20_03094 and MPMX20_03095 are separated by 69 nucleotidesMPMX20_03095 and MPMX20_03096 overlap by 26 nucleotides MPMX20_03092: MPMX20_03092 - Transcriptional regulatory protein BtsR, at 3,244,887 to 3,245,606 _03092 MPMX20_03093: MPMX20_03093 - Sensor histidine kinase BtsS, at 3,245,600 to 3,247,291 _03093 MPMX20_03094: MPMX20_03094 - HTH-type transcriptional regulator MlrA, at 3,247,503 to 3,248,243 _03094 MPMX20_03095: MPMX20_03095 - hypothetical protein, at 3,248,313 to 3,248,426 _03095 MPMX20_03096: MPMX20_03096 - Glycine betaine uptake system permease protein YehW, at 3,248,401 to 3,249,138 _03096
Group Condition MPMX20_03092 MPMX20_03093 MPMX20_03094 MPMX20_03095 MPMX20_03096
nitrogen source butyrate (N) +0.7 -0.4 +0.2 -4.8 -1.0
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -0.2 -0.1 -1.5 -3.7 +0.2
mixed community 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 +0.1 -0.1 -0.2 -4.3 -0.5
carbon source butyrate (C) +0.8 +0.1 -0.1 -5.0 -0.1
carbon source oxalate (C) +0.3 +0.0 -2.5 -0.9 -0.9
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.6 +0.4 -3.1 -1.5
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.1 -0.7 -2.4 -0.7
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.5 -1.1 -1.1 -0.9
nitrogen source L-Arginine (N) -0.0 +0.1 -0.5 -2.5 -0.5
mixed community 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 -0.6 -0.1 -0.4 -2.9 +0.6
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.2 -0.0 -1.8 -1.4 -0.2
carbon source L-Phenylalanine (C) -0.1 +0.1 -1.0 -2.3 +0.1
carbon source D-Tagatose (C) +0.1 +0.2 -1.2 -1.4 -0.9
nitrogen source Uridine (N) +0.1 -0.1 -1.1 -2.1 +0.0
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.0 -2.0 -0.5 -1.0
carbon source L-Threonine (C) +0.4 -0.1 -0.4 -2.2 +0.0
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.4 +0.2 -1.0 -1.7
mixed community M9 plate, 1:1 coculture with Agromyces sp. SAI_196 -0.1 +0.1 -1.2 -1.8 +1.0
mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.3 +0.3 -1.3 -1.2 +0.5
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.0 +0.9 -1.0 -0.7
carbon source L-Fucose (C) +0.4 +0.3 +0.2 -1.2 -1.1
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -1.3 +0.7 +0.8 -1.1 -0.3
carbon source Xylitol (C) +0.0 +0.4 -0.4 +1.1 -1.3
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 +0.8 +0.3 -0.4 -1.3 +0.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.6 -0.1 -1.2 +2.3 +0.1
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.5 +0.9 -0.8 -0.6
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 +0.3 -0.5 +0.1 +1.8 -1.0
carbon source propionate (C) +0.2 +0.2 -1.4 +2.2 -0.2
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.1 +0.2 +2.0 -0.9 -0.2
carbon source octanoate (C) -0.8 +0.7 +0.4 +1.1 +0.6
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