Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02956 and MPMX20_02957 overlap by 20 nucleotidesMPMX20_02957 and MPMX20_02958 are separated by 61 nucleotidesMPMX20_02958 and MPMX20_02959 are separated by 352 nucleotidesMPMX20_02959 and MPMX20_02960 are separated by 57 nucleotides MPMX20_02956: MPMX20_02956 - Very short patch repair protein, at 3,082,226 to 3,082,717 _02956 MPMX20_02957: MPMX20_02957 - DNA-cytosine methyltransferase, at 3,082,698 to 3,084,113 _02957 MPMX20_02958: MPMX20_02958 - putative protein YedJ, at 3,084,175 to 3,084,876 _02958 MPMX20_02959: MPMX20_02959 - Outer membrane porin N, at 3,085,229 to 3,086,395 _02959 MPMX20_02960: MPMX20_02960 - N-acetylmuramic acid 6-phosphate etherase, at 3,086,453 to 3,087,316 _02960
Group Condition MPMX20_02956 MPMX20_02957 MPMX20_02958 MPMX20_02959 MPMX20_02960
nitrogen source L-Asparagine (N) -0.2 -2.0 -0.0 -0.1 -0.5
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -1.2 -1.0 -0.1 +0.1 -0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.8 -0.7 -0.6 -0.4 -0.2
carbon source a-Ketoglutaric (C) -0.5 -1.6 +0.1 -0.2 -0.3
nitrogen source L-Lysine (N) -0.2 -1.4 -0.3 -0.1 -0.5
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 -1.6 -0.2 -0.1 -0.4
nitrogen source L-Aspartic Acid (N) -0.2 -2.3 +0.1 -0.0 +0.2
mixed community M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -1.2 +0.3 -0.0 -0.8
carbon source L-Isoleucine (C) -0.4 -1.0 -0.6 -0.1 +0.3
carbon source Fumarate (C) +0.2 -2.1 +0.4 -0.1 -0.0
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -1.0 +0.4 -0.1 -0.3
carbon source D-Lactate (C) +0.3 -1.8 +0.1 -0.2 +0.2
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.8 -0.3 +0.4 -0.6
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.8 +0.6 +0.0 -0.6
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -1.3 -0.2 +0.1 +0.5
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.9 -1.1 +0.1 +0.1 -0.6
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -1.1 +1.0 +0.2 -0.5
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.9 +0.6 +0.1 -0.5
mixed community M9 plate, 1:1 coculture with Amycolatopsis sp. SAI_101 -0.4 -1.0 -0.1 +0.1 +1.0
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 -0.4 -0.6 -0.1 -0.1 +1.1
mixed community TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.7 +1.0 +0.1 -0.5
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.1 -1.2 +0.3 +0.3 +0.7
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.8 -0.9 +0.6 -0.0 -0.3
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.9 +1.0 +0.2 -0.2
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.7 -0.9 +0.6 +0.1 -0.1
mixed community TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 +0.4 -0.5 +1.0 +0.3 -0.1
mixed community TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 +1.4 -0.1 +0.7 +0.1 -0.1
carbon source D-Glc (C) +0.4 +1.6 +0.2 +0.1 +0.3
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 +0.6 +0.6 +0.6 +0.2 +0.6
mixed community 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +2.8 +0.2 +0.1 -0.0
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