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Homologs
Fitness for 5 genes in
Enterobacter sp. TBS_079
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX20_02895 and MPMX20_02896 overlap by 4 nucleotides
MPMX20_02896 and MPMX20_02897 are separated by 3 nucleotides
MPMX20_02897 and MPMX20_02898 overlap by 4 nucleotides
MPMX20_02898 and MPMX20_02899 are separated by 471 nucleotides
MPMX20_02895: MPMX20_02895 - hypothetical protein, at 3,043,674 to 3,044,060
_02895
MPMX20_02896: MPMX20_02896 - Lysozyme RrrD, at 3,044,057 to 3,044,497
_02896
MPMX20_02897: MPMX20_02897 - hypothetical protein, at 3,044,501 to 3,044,776
_02897
MPMX20_02898: MPMX20_02898 - hypothetical protein, at 3,044,773 to 3,045,174
_02898
MPMX20_02899: MPMX20_02899 - hypothetical protein, at 3,045,646 to 3,046,335
_02899
Group
Condition
MPMX20
_02895
MPMX20
_02896
MPMX20
_02897
MPMX20
_02898
MPMX20
_02899
mixed community
LB agar plate coculture with Mixed culture; Pseudomonas plecoglossicida TBS_049 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.5
-2.7
-1.3
-3.5
-1.6
supernatant
mutant library grown in Supernatant; Chryseobacterium proteolyticum TBS_027 grown in LB
-2.0
-2.3
-1.6
-2.4
-1.8
supernatant
mutant library grown in Supernatant; Rhizobium pusense TBS_045 grown in LB
-2.1
-2.2
-1.5
-2.3
-1.9
supernatant
mutant library grown in Supernatant; Pseudomonas plecoglossicida TBS_049 grown in LB
-2.1
-2.1
-1.5
-2.5
-1.7
mixed community
LB agar plate coculture with Mixed culture; Chryseobacterium proteolyticum TBS_027 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.4
-2.6
-1.2
-2.5
-0.8
supernatant
mutant library grown in Supernatant; Rhizobium pusense TBS_038 grown in LB
-2.0
-2.4
-1.5
-2.0
-1.7
mixed community
LB agar plate coculture with Mixed culture; Chryseobacterium gleum TBS_021 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.4
-2.4
-1.5
-2.2
-0.9
supernatant
mutant library grown in Supernatant; Pseudomonas frederiksbergensis TBS_004 grown in LB
-1.9
-2.4
-1.4
-1.7
-1.9
mixed community
LB agar plate coculture with Mixed culture; Bacillus zanthoxyli TBS_040 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.2
-2.4
-1.2
-2.1
-1.1
supernatant
mutant library grown in Supernatant; Lysobacter soli TBS_075 grown in LB
-1.8
-2.0
-1.5
-1.7
-1.7
mixed community
TSB plate, 1:1 coculture with Paraburkholderia pittii CO4
-1.9
-1.9
-1.5
-1.4
-1.9
supernatant
mutant library grown in Supernatant; Streptomyces ambofaciens SAI_104 grown in LB
-1.6
-2.1
-1.3
-2.1
-1.5
mixed community
LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.0
-2.3
-1.2
-2.1
-1.0
mixed community
LB agar plate coculture with Mixed culture; Streptomyces ambofaciens SAI_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
-2.5
-2.3
-1.6
-1.6
-0.5
supernatant
mutant library grown in Supernatant; Bacillus zanthoxyli TBS_046 grown in LB
-1.6
-1.9
-1.5
-1.9
-1.4
supernatant
mutant library grown in Supernatant; Brevibacillus agri TBS_043 grown in LB
-1.6
-2.0
-1.2
-1.1
-2.4
mixed community
0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4
-1.4
-2.0
-1.3
-0.7
-2.9
supernatant
mutant library grown in Supernatant; Pseudomonas lini TBS_031 grown in LB
-1.5
-2.0
-1.1
-1.9
-1.7
supernatant
mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in R2A
-2.1
-2.3
-0.9
-1.8
-1.0
supernatant
mutant library grown in Supernatant; Bacillus megaterium TBS_037 grown in LB
-1.7
-2.0
-1.3
-1.7
-1.3
supernatant
mutant library grown in Supernatant; Chryseobacterium gleum TBS_021 grown in LB
-2.0
-2.3
-1.4
-0.8
-1.4
nitrogen source
L-Asparagine (N)
+2.3
+2.2
+0.6
+2.9
-0.6
nitrogen source
L-Serine (N)
+2.0
+2.0
+0.4
+2.2
+1.8
nitrogen source
L-Glutamine (N)
+2.2
+2.3
+0.4
+2.5
+1.2
nitrogen source
L-Arginine (N)
+2.3
+2.3
+0.6
+2.7
+0.9
nitrogen source
L-Histidine (N)
+1.9
+2.0
+0.9
+2.1
+2.2
nitrogen source
butyrate (N)
+2.0
+2.0
+0.8
+2.4
+1.9
nitrogen source
L-tyrosine (N)
+1.9
+2.1
+0.9
+2.2
+1.9
nitrogen source
Thymidine (N)
+2.3
+2.4
+0.6
+2.6
+2.9
nitrogen source
L-Leucine (N)
+2.7
+3.2
+1.3
+3.3
+2.8
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