Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02822 and MPMX20_02823 overlap by 4 nucleotidesMPMX20_02823 and MPMX20_02824 overlap by 4 nucleotidesMPMX20_02824 and MPMX20_02825 are separated by 103 nucleotidesMPMX20_02825 and MPMX20_02826 are separated by 285 nucleotides MPMX20_02822: MPMX20_02822 - hypothetical protein, at 2,980,727 to 2,982,001 _02822 MPMX20_02823: MPMX20_02823 - Lipopolysaccharide export system ATP-binding protein LptB, at 2,981,998 to 2,982,873 _02823 MPMX20_02824: MPMX20_02824 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 2,982,870 to 2,983,586 _02824 MPMX20_02825: MPMX20_02825 - Cold shock-like protein CspB, at 2,983,690 to 2,983,902 _02825 MPMX20_02826: MPMX20_02826 - Cold shock-like protein CspB, at 2,984,188 to 2,984,406 _02826
Group Condition MPMX20_02822 MPMX20_02823 MPMX20_02824 MPMX20_02825 MPMX20_02826
carbon source Putrescine (C) -0.5 -0.3 -0.3 -1.5 -4.0
carbon source a-Ketoglutaric (C) -0.2 -0.1 -0.6 -1.6 -3.9
carbon source Adenine (C) -0.2 -0.0 -0.3 -2.0 -3.8
carbon source propionate (C) -1.3 -0.1 -0.9 -0.3 -3.5
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.1 -0.3 -1.3 -4.0
nitrogen source Gelatin (N) -0.1 -0.3 -0.4 -1.0 -3.7
carbon source L-Isoleucine (C) -0.3 -0.1 -0.3 -2.3 -2.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.0 -0.1 -0.2 -2.7 -2.3
carbon source Thymine (C) -0.5 -0.0 -0.2 -2.2 -2.4
carbon source D-Cellobiose (C) -0.4 -0.1 -0.1 -2.1 -2.6
carbon source butyrate (C) -0.1 -0.0 -0.4 -3.2 -1.3
carbon source L-Arginine (C) +0.1 -0.2 -0.3 -1.8 -2.9
carbon source Parabanic Acid (C) -0.2 -0.1 +0.1 -0.8 -3.8
carbon source acetate (C) -0.1 -0.2 -0.4 -1.2 -2.9
carbon source D-Lactate (C) +0.1 -0.2 -0.3 -1.4 -3.1
carbon source L-Citrulline (C) -0.4 -0.1 -0.2 -2.9 -1.2
carbon source Citric Acid (C) +0.1 +0.0 -0.1 -2.2 -2.4
carbon source L-Proline (C) -0.5 -0.2 -0.3 -0.6 -2.9
carbon source octanoate (C) -0.2 +0.0 -0.4 -2.4 -1.5
carbon source L-Malic (C) +0.0 -0.2 -0.4 -2.1 -1.7
carbon source D-Alanine (C) +0.1 +0.1 -0.1 -0.8 -3.6
carbon source Ethanol (C) -0.5 -0.7 +0.2 -1.5 -1.7
carbon source L-Valine (C) -0.1 -0.3 -0.4 -0.5 -2.9
carbon source succinate (C) +0.1 -0.2 -0.2 -1.0 -2.9
nitrogen source L-Threonine (N) -0.4 -0.4 -0.4 +0.2 -3.1
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.7 +0.5 +0.2 -1.4 +2.2
mixed community M9 plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.1 +0.4 +0.2 +0.9 +2.8
mixed community 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 -0.0 +1.3 +0.2 +0.7 +2.3
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.3 +0.7 -0.0 +1.5 +2.7
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +1.1 +1.3 +0.4 +2.2
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