Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_02756 and MPMX20_02757 are separated by 234 nucleotidesMPMX20_02757 and MPMX20_02758 are separated by 339 nucleotidesMPMX20_02758 and MPMX20_02759 are separated by 124 nucleotidesMPMX20_02759 and MPMX20_02760 are separated by 55 nucleotides MPMX20_02756: MPMX20_02756 - Phosphogluconate dehydratase, at 2,910,290 to 2,912,101 _02756 MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811 _02757 MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038 _02758 MPMX20_02759: MPMX20_02759 - Pyruvate kinase II, at 2,915,163 to 2,916,605 _02759 MPMX20_02760: MPMX20_02760 - Lipid A biosynthesis myristoyltransferase, at 2,916,661 to 2,917,632 _02760
Group Condition MPMX20_02756 MPMX20_02757 MPMX20_02758 MPMX20_02759 MPMX20_02760
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01 +0.1 -4.4 +0.2 -0.3 N.D.
mixed community AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01 -0.0 -4.5 +0.1 +0.2 N.D.
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 +0.4 -3.9 -0.3 -0.4 N.D.
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -0.2 -3.4 +0.1 -0.2 N.D.
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 +0.1 -3.3 -0.4 +0.0 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.1 -2.0 -0.8 -0.8 N.D.
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.2 -3.6 +0.3 +0.2 N.D.
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.1 -2.6 -0.4 -0.1 N.D.
carbon source Beta-Lactose (C) -0.1 -1.0 -1.0 -1.2 N.D.
carbon source Fumarate (C) +0.0 -0.3 -0.8 -2.0 N.D.
carbon source L-Glutamic (C) +0.1 -1.0 -0.6 -1.5 N.D.
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001 +0.0 -2.9 -0.1 -0.0 N.D.
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.7 -2.0 -0.3 -1.2 N.D.
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01 +0.0 -2.9 +0.1 -0.1 N.D.
carbon source succinate (C) -0.4 -0.4 -0.6 -1.4 N.D.
carbon source Tween 20 (C) +0.2 -0.6 -2.1 -0.2 N.D.
carbon source Gelatin (C) -0.1 -1.4 -1.0 -0.3 N.D.
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 +0.0 -2.6 -0.0 -0.1 N.D.
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 +0.0 -2.3 +0.5 -0.8 N.D.
carbon source Glucuronamide (C) -0.1 -1.0 -0.7 -0.8 N.D.
nitrogen source L-Glutamine (N) -0.0 -1.8 -0.4 -0.5 N.D.
carbon source L-Asparagine (C) +0.1 -0.6 -0.8 -1.3 N.D.
carbon source Adenine (C) +0.1 -1.6 -0.8 -0.1 N.D.
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 +0.1 -3.1 +0.2 +0.5 N.D.
carbon source L-Proline (C) -0.2 +0.5 -0.6 -1.5 N.D.
mixed community 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 +0.6 -1.1 -0.2 -0.9 N.D.
mixed community 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +1.3 -0.0 -1.0 N.D.
mixed community 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +2.0 +0.1 -0.5 N.D.
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.3 +2.4 -0.1 N.D.
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +0.9 +0.7 +1.0 N.D.
remove
MPMX20_02756
plot		 remove
MPMX20_02757
plot		 remove
MPMX20_02758		 remove
MPMX20_02759
plot		 remove
MPMX20_02760
plot