Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02754 and MPMX20_02755 are separated by 40 nucleotidesMPMX20_02755 and MPMX20_02756 are separated by 39 nucleotidesMPMX20_02756 and MPMX20_02757 are separated by 234 nucleotidesMPMX20_02757 and MPMX20_02758 are separated by 339 nucleotides MPMX20_02754: MPMX20_02754 - Formate-dependent phosphoribosylglycinamide formyltransferase, at 2,908,390 to 2,909,568 _02754 MPMX20_02755: MPMX20_02755 - KHG/KDPG aldolase, at 2,909,609 to 2,910,250 _02755 MPMX20_02756: MPMX20_02756 - Phosphogluconate dehydratase, at 2,910,290 to 2,912,101 _02756 MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811 _02757 MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038 _02758
Group Condition MPMX20_02754 MPMX20_02755 MPMX20_02756 MPMX20_02757 MPMX20_02758
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 +0.1 -6.3 +0.1 -3.1 +0.2
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 -0.1 -6.1 +0.0 -2.3 +0.5
carbon source Glucuronamide (C) -0.3 -5.7 -0.1 -1.0 -0.7
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 -0.0 -5.2 +0.0 -2.6 -0.0
carbon source D-Galacturonic Acid (C) -0.1 -5.3 +0.1 -1.6 -0.4
carbon source D-Gluconic Acid (C) -0.3 -5.4 -1.0 -0.3 -0.4
carbon source D-Glucuronic Acid (C) -0.0 -5.0 -0.1 -1.3 -0.3
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.01 -0.2 -4.6 -0.3 -1.2 -0.1
nitrogen source L-Glutamine (N) -0.3 -3.3 -0.0 -1.8 -0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -1.1 -2.0 -0.1 -1.4 -0.8
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -0.2 -1.1 +0.4 -3.9 -0.3
mixed community AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01 -0.2 -0.4 -0.0 -4.5 +0.1
nitrogen source Cytidine (N) -0.2 -3.4 -0.0 -0.2 -0.9
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 +0.3 -1.3 -0.2 -3.4 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 -4.4 -0.0 +0.4 -0.4
nitrogen source Gly-Glu (N) +0.0 -2.6 -0.1 -0.9 -0.8
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01 +0.2 -0.5 +0.1 -4.4 +0.2
nitrogen source Adenosine (N) -0.1 -3.7 -0.1 -0.1 -0.3
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar +0.0 -1.2 -0.1 -2.6 -0.4
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -1.0 +0.3 -0.2 -3.6 +0.3
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.1 -0.4 +0.1 -3.3 -0.4
nitrogen source D-Tagatose (N) +0.3 -2.4 +0.1 -1.0 -1.0
nitrogen source NAG (N) -0.1 -4.0 -0.0 +0.8 -0.5
carbon source Adenine (C) -0.2 -1.1 +0.1 -1.6 -0.8
carbon source Tween 20 (C) +0.0 -1.0 +0.2 -0.6 -2.1
mixed community TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 +0.1 -3.1 +0.0 -0.9 +0.6
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 +0.7 -2.7 -0.0 -1.0 +0.1
nitrogen source D-Serine (N) -0.1 -2.5 -0.3 +0.7 -0.4
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +0.4 -1.4 +0.3 -1.5 +0.1
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 -0.7 -0.3 +0.3 +2.4
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