Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02711 and MPMX20_02712 are separated by 169 nucleotidesMPMX20_02712 and MPMX20_02713 are separated by 37 nucleotidesMPMX20_02713 and MPMX20_02714 are separated by 66 nucleotidesMPMX20_02714 and MPMX20_02715 are separated by 131 nucleotides MPMX20_02711: MPMX20_02711 - Long-chain-fatty-acid--CoA ligase, at 2,864,121 to 2,865,839 _02711 MPMX20_02712: MPMX20_02712 - Outer membrane protein Slp, at 2,866,009 to 2,866,590 _02712 MPMX20_02713: MPMX20_02713 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,866,628 to 2,867,323 _02713 MPMX20_02714: MPMX20_02714 - putative ATP-dependent DNA helicase YoaA, at 2,867,390 to 2,869,300 _02714 MPMX20_02715: MPMX20_02715 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,869,432 to 2,869,776 _02715
Group Condition MPMX20_02711 MPMX20_02712 MPMX20_02713 MPMX20_02714 MPMX20_02715
carbon source Tween 20 (C) -2.5 +0.2 N.D. +0.1 -0.1
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 -0.4 -1.0 N.D. -0.1 -0.5
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -1.0 N.D. -0.3 -0.3
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -1.0 N.D. -0.1 -0.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.5 -1.0 N.D. +0.0 +0.2
mixed community Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048 -0.5 -0.3 N.D. +0.1 -0.6
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.6 N.D. +0.3 -0.7
carbon source octanoate (C) -0.9 +0.8 N.D. -0.3 -0.6
carbon source Glycine (C) -0.4 -0.5 N.D. +0.4 -0.3
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.7 N.D. +0.4 -0.2
carbon source D-Arabinose (C) -0.8 +0.6 N.D. -0.4 -0.1
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 -0.9 N.D. +0.5 -0.4
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.3 N.D. -0.5 -0.4
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.2 -0.9 N.D. +0.0 +0.5
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.8 N.D. -0.3 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.8 N.D. -0.1 -0.3
carbon source D-Lactate (C) +0.9 -0.3 N.D. +0.0 -0.4
mixed community 1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 +0.4 +0.6 N.D. -0.5 -0.0
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 -0.6 N.D. -0.3 +1.5
carbon source oxalate (C) -0.5 +0.4 N.D. +0.3 +0.3
mixed community TSB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 +0.7 N.D. +0.3 -0.5
carbon source L-Isoleucine (C) -0.5 +0.3 N.D. +0.5 +0.2
carbon source L-Phenylalanine (C) -0.4 +0.8 N.D. -0.1 +0.3
mixed community M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 -0.0 N.D. -0.3 +1.2
mixed community TSB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +1.0 N.D. +0.3 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.0 +1.5 N.D. +0.1 -0.2
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.7 N.D. +1.1 -0.8
carbon source Glycerol (C) +0.2 +1.3 N.D. -0.0 +0.0
carbon source Trisodium citrate (C) +0.4 +0.8 N.D. +0.3 +0.3
mixed community M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.3 +2.1 N.D. +0.4 -0.2
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