Fitness for 5 genes in Enterobacter sp. TBS_079

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

500 ntMPMX20_02472 and MPMX20_02473 are separated by 166 nucleotidesMPMX20_02473 and MPMX20_02474 are separated by 88 nucleotidesMPMX20_02474 and MPMX20_02475 overlap by 4 nucleotidesMPMX20_02475 and MPMX20_02476 overlap by 14 nucleotides MPMX20_02472: MPMX20_02472 - Phage shock protein A, at 2,612,081 to 2,612,749 _02472 MPMX20_02473: MPMX20_02473 - Psp operon transcriptional activator, at 2,612,916 to 2,613,893 _02473 MPMX20_02474: MPMX20_02474 - Peptide transport periplasmic protein SapA, at 2,613,982 to 2,615,622 _02474 MPMX20_02475: MPMX20_02475 - Putrescine export system permease protein SapB, at 2,615,619 to 2,616,584 _02475 MPMX20_02476: MPMX20_02476 - Putrescine export system permease protein SapC, at 2,616,571 to 2,617,461 _02476
Group Condition MPMX20_02472 MPMX20_02473 MPMX20_02474 MPMX20_02475 MPMX20_02476
carbon source Fumarate (C) -1.1 -0.1 -0.9 -4.3 -3.9
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -1.1 -0.1 -1.5 -3.6 -3.5
carbon source L-Asparagine (C) -0.5 +0.1 -2.0 -3.3 -3.8
carbon source succinate (C) -0.5 -0.2 -1.7 -4.0 -3.1
carbon source L-Glutamic (C) -0.7 -0.2 -1.1 -3.2 -3.9
carbon source L-Proline (C) -0.3 +0.0 -1.2 -4.0 -3.6
carbon source Citric Acid (C) -0.9 -0.0 -0.9 -3.6 -3.2
carbon source L-Phenylalanine (C) -0.4 +0.0 -0.6 -3.6 -3.8
carbon source L-Aspartic Acid (C) -0.9 -0.1 -1.1 -3.5 -2.5
carbon source a-Ketoglutaric (C) -0.6 -0.1 -0.7 -2.9 -3.6
carbon source Formate (C) -0.6 -0.1 -1.5 -2.0 -3.6
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01 -0.5 +0.1 -1.1 -2.6 -3.6
carbon source D-Alanine (C) -0.9 -0.0 -1.4 -2.8 -2.7
carbon source D,L-Malic Acid (C) -0.6 -0.3 -1.6 -2.6 -2.6
carbon source D-Lactate (C) -0.6 -0.2 -1.0 -3.2 -2.8
carbon source Sucrose (C) -0.6 -0.2 -0.7 -2.7 -3.3
carbon source casaminos (C) -0.6 +0.0 -1.2 -1.8 -4.0
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -0.9 +0.4 -1.6 -2.4 -2.9
carbon source L-Fucose (C) -0.1 +0.2 -1.2 -2.6 -3.7
carbon source Trisodium citrate (C) -0.7 +0.2 -0.5 -3.3 -3.2
carbon source Glycerol (C) -1.1 +0.1 -0.5 -2.9 -3.0
carbon source L-Histidine (C) -0.6 +0.1 -0.8 -3.6 -2.4
carbon source L-Threonine (C) -0.3 -0.1 -0.4 -2.8 -3.7
carbon source D-Trehalose (C) -0.4 -0.1 -0.6 -2.7 -3.4
nitrogen source Thymine (N) -0.5 -0.1 -0.7 -2.2 -3.5
carbon source D-Glucuronic Acid (C) -0.8 +0.1 -0.8 -2.9 -2.6
motility; inner cut Motility test in 1X LB; 1 day; inner cut; 0.3% agar -0.7 -0.0 -0.8 -2.9 -2.7
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -1.2 +0.1 -1.1 -2.2 -2.6
carbon source m-Inositol (C) -0.5 -0.1 -1.0 -2.6 -2.8
carbon source Glycine (C) -0.6 +0.3 -0.6 -2.3 -3.5
remove
MPMX20_02472
plot		 remove
MPMX20_02473
plot		 remove
MPMX20_02474		 remove
MPMX20_02475
plot		 remove
MPMX20_02476
plot