Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

Or view all 337 experiments or choose conditions or try the comparative fitness browser

Group	Condition	MPMX20_02212	MPMX20_02213	MPMX20_02214	MPMX20_02215	MPMX20_02216
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.1	-0.1	-0.4	-1.6	-3.1
mixed community	TSB plate, 1:1 coculture with Rhizobium pusense TBS_045	-0.5	-0.3	-0.3	+0.1	-2.5
mixed community	M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2	-0.2	-0.0	-0.2	-0.4	-2.6
carbon source	D-Tagatose (C)	-0.4	-0.2	+0.2	-0.4	-2.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	+2.2	+0.5	-1.5	-1.9	-2.7
carbon source	D-Arabinose (C)	-0.2	-0.1	-0.4	-1.0	-1.5
carbon source	Ethanol (C)	-0.2	-0.2	-0.7	-0.6	-1.3
carbon source	L-Threonine (C)	-0.0	-0.0	-0.2	-1.0	-1.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+1.1	-0.0	-0.5	-1.0	-2.2
carbon source	Fumarate (C)	-0.9	+0.2	-0.3	-0.5	-0.7
mixed community	1X LB plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272	-0.7	+0.0	-0.1	-0.3	-1.2
carbon source	oxalate (C)	-0.2	+0.1	-0.7	-0.7	-0.7
carbon source	L-Lactate (C)	-0.1	+0.2	-0.3	-0.7	-1.2
mixed community	TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039	-0.0	-0.2	-0.5	+0.2	-1.5
carbon source	a-Ketoglutaric (C)	-0.5	+0.1	+0.1	-0.6	-1.1
mixed community	1X LB plate, 1:1 coculture with Lysobacter soli TBS_075	-0.3	+0.2	-0.5	-0.2	-1.2
carbon source	Adenine (C)	-0.3	+0.4	+0.1	-0.9	-1.2
mixed community	M9 plate, 1:1 coculture with Bacillus megaterium TBS_037	+0.3	-0.3	-0.3	+0.4	-1.5
mixed community	M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2	+0.3	-0.5	-0.6	+0.4	-0.8
carbon source	L-Arginine (C)	-0.4	+0.1	-0.8	-0.5	+0.6
mixed community	M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272	-0.5	-0.4	-0.1	+1.1	-0.5
mixed community	1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.4	+1.0	-0.4	+0.2	-0.6
mixed community	AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001	+0.4	-0.6	-0.4	-0.5	+1.0
carbon source	D-Lactate (C)	+1.5	-0.1	+0.4	-0.9	-0.0
mixed community	1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.5	+0.5	-0.2	+1.3	-0.2
nitrogen source	L-Histidine (N)	-0.6	-0.1	+0.2	+0.6	+1.0
mixed community	AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001	-0.3	+0.1	-0.6	+0.5	+1.4
carbon source	acetate (C)	+1.6	+0.1	-0.1	-0.4	+0.3
mixed community	TSB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.4	-0.0	-0.4	+0.1	+2.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+0.2	-0.0	-0.1	+1.2	+1.5