Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02210 and MPMX20_02211 are separated by 57 nucleotidesMPMX20_02211 and MPMX20_02212 are separated by 282 nucleotidesMPMX20_02212 and MPMX20_02213 are separated by 186 nucleotidesMPMX20_02213 and MPMX20_02214 are separated by 64 nucleotides MPMX20_02210: MPMX20_02210 - Methyl-accepting chemotaxis protein III, at 2,321,120 to 2,322,811 _02210 MPMX20_02211: MPMX20_02211 - Quinate/shikimate dehydrogenase (quinone), at 2,322,869 to 2,325,250 _02211 MPMX20_02212: MPMX20_02212 - HTH-type transcriptional regulator GbpR, at 2,325,533 to 2,326,456 _02212 MPMX20_02213: MPMX20_02213 - putative oxidoreductase YghA, at 2,326,643 to 2,327,527 _02213 MPMX20_02214: MPMX20_02214 - Protein YgiW, at 2,327,592 to 2,327,981 _02214
Group Condition MPMX20_02210 MPMX20_02211 MPMX20_02212 MPMX20_02213 MPMX20_02214
mixed community TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.5 -0.3 -0.2 -0.7
carbon source Glycerol (C) -0.1 -0.2 -0.5 -0.0 -0.7
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 -0.0 -0.6 -0.2 +0.1
carbon source succinate (C) -0.2 +0.1 -1.0 +0.3 -0.3
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -0.5 -0.1 +0.4 -0.6 -0.4
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 -0.2 -0.1 +0.3 -0.5 -0.6
mixed community TSB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.3 -0.4 -0.5 -0.4
carbon source Fumarate (C) +0.0 +0.2 -0.9 +0.2 -0.3
mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.4 +0.4 -0.1 -0.3 -0.3
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.5 +0.3 -0.2 -1.0 -0.3
carbon source Ethanol (C) +0.4 +0.1 -0.2 -0.2 -0.7
mixed community M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027 +0.4 +0.2 -0.5 -0.3 -0.3
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.7 -0.2 -0.6 -0.2 -0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.1 -0.5 -0.5 +0.7
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.4 +0.3 -0.0 -0.2 -0.7
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -0.4 +0.1 +0.2 -0.5 +0.6
carbon source D,L-Malic Acid (C) +0.5 +0.4 +0.1 -0.1 -0.8
mixed community 1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 -0.1 -0.4 +1.0 -0.4
carbon source pyruvate (C) -0.2 +0.1 +0.6 +0.1 -0.6
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.1 +0.8 -0.2 -0.1
mixed community TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b -0.2 -0.1 -0.4 -0.0 +0.9
carbon source Sucrose (C) -0.2 +0.4 +0.3 +0.3 -0.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 +0.2 +1.1 -0.0 -0.5
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.8 +0.5 -0.2 -0.2 -0.3
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 +0.4 +0.1 +0.8 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.1 -0.3 +0.8 -0.2
mixed community M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 -0.3 +1.1 -0.1 +0.1
carbon source acetate (C) +0.0 +0.1 +1.6 +0.1 -0.1
carbon source D-Lactate (C) -0.1 +0.4 +1.5 -0.1 +0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.9 +0.1 +2.2 +0.5 -1.5
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