Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02199 and MPMX20_02200 are separated by 120 nucleotidesMPMX20_02200 and MPMX20_02201 are separated by 4 nucleotidesMPMX20_02201 and MPMX20_02202 overlap by 4 nucleotidesMPMX20_02202 and MPMX20_02203 are separated by 35 nucleotides MPMX20_02199: MPMX20_02199 - Outer membrane efflux protein BepC, at 2,290,958 to 2,292,295 _02199 MPMX20_02200: MPMX20_02200 - hypothetical protein, at 2,292,416 to 2,310,421 _02200 MPMX20_02201: MPMX20_02201 - Toxin RTX-I translocation ATP-binding protein, at 2,310,426 to 2,312,678 _02201 MPMX20_02202: MPMX20_02202 - Type I secretion system membrane fusion protein PrsE, at 2,312,675 to 2,313,850 _02202 MPMX20_02203: MPMX20_02203 - hypothetical protein, at 2,313,886 to 2,314,770 _02203
Group Condition MPMX20_02199 MPMX20_02200 MPMX20_02201 MPMX20_02202 MPMX20_02203
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.4 +0.2 +0.2 +0.0 -5.3
carbon source Glycine (C) +0.0 +0.2 +0.0 +0.1 -5.6
carbon source butyrate (C) -0.1 +0.2 +0.2 +0.1 -5.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.6 +0.1 +0.1 -0.1 -4.1
carbon source D-Ribose (C) +0.0 +0.2 +0.1 -0.2 -3.6
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.4 +0.1 +0.1 +0.0 -3.4
nitrogen source Gelatin (N) +0.0 +0.1 +0.1 -0.1 -3.4
mixed community TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 -0.2 -0.0 -0.6 -0.2 -2.2
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.0 +0.1 -0.7 -0.2 -2.3
carbon source Itaconic Acid (C) -0.1 +0.1 +0.3 +0.1 -3.4
carbon source D-Galacturonic Acid (C) -0.2 +0.2 +0.1 +0.0 -3.1
mixed community M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 +0.0 -0.0 -0.9 -0.2 -1.8
carbon source Cytosine (C) -0.1 +0.1 +0.1 -0.2 -2.6
nitrogen source D-Salicin (N) -0.0 +0.0 +0.0 -0.1 -2.5
carbon source D,L-Malic Acid (C) -0.1 +0.0 +0.1 -0.0 -2.5
carbon source Adenine (C) -0.1 +0.1 +0.0 +0.1 -2.7
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.1 +0.0 -0.3 -2.1
carbon source Beta-Lactose (C) +0.0 +0.2 +0.2 -0.1 -2.5
carbon source L-Aspartic Acid (C) -0.1 +0.2 +0.1 -0.1 -2.2
carbon source D-Glucose-6-Phosphate (C) -0.0 +0.2 -0.0 -0.0 -2.2
carbon source D-Tagatose (C) -0.1 +0.1 +0.0 +0.1 -2.2
carbon source Formate (C) -0.1 +0.2 +0.1 -0.0 -2.1
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 +0.2 +0.1 -0.2 -2.0
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.0 +0.1 +0.2 -2.2
carbon source Uridine (C) +0.0 +0.2 +0.1 +0.1 -2.1
carbon source Inosine (C) -0.1 +0.1 +0.2 +0.0 -1.9
carbon source Citric Acid (C) -0.0 +0.2 +0.2 +0.0 -2.0
carbon source Glycerol (C) -0.2 +0.1 +0.5 +0.1 -1.5
mixed community M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 -0.1 -0.0 -0.1 -0.1 +2.2
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.0 -0.0 +0.1 -0.0 +2.9
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