Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02077 and MPMX20_02078 are separated by 11 nucleotidesMPMX20_02078 and MPMX20_02079 are separated by 152 nucleotidesMPMX20_02079 and MPMX20_02080 overlap by 4 nucleotidesMPMX20_02080 and MPMX20_02081 are separated by 18 nucleotides MPMX20_02077: MPMX20_02077 - hypothetical protein, at 2,169,582 to 2,170,298 _02077 MPMX20_02078: MPMX20_02078 - hypothetical protein, at 2,170,310 to 2,170,942 _02078 MPMX20_02079: MPMX20_02079 - D-alanine--D-alanine ligase, at 2,171,095 to 2,174,697 _02079 MPMX20_02080: MPMX20_02080 - Allophanate hydrolase, at 2,174,694 to 2,176,493 _02080 MPMX20_02081: MPMX20_02081 - Tat proofreading chaperone DmsD, at 2,176,512 to 2,177,126 _02081
Group Condition MPMX20_02077 MPMX20_02078 MPMX20_02079 MPMX20_02080 MPMX20_02081
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -0.3 -0.8 -0.1 -0.4 +0.4
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +0.2 -0.1 -0.2 -0.5
mixed community M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.1 +0.0 -0.2 -0.1 +0.3
mixed community 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 -0.1 -0.3 -0.1 -0.7
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.4 -0.5 +0.0 +0.1 +0.5
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.9 -0.2 -0.2 +0.2 +1.0
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 -0.3 -0.3 -0.2 +0.4
carbon source octanoate (C) -0.4 -0.5 -0.0 +0.3 +0.6
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +0.0 -0.2 -0.1 +1.1
mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 +0.2 +0.5 -0.1 +0.2 -0.6
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 -0.0 -0.1 +0.0 +1.0
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.2 +0.5 -0.4 -0.1 +0.7
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.6 +0.3 -0.2 +0.3 -0.2
carbon source Adenine (C) +0.4 +0.5 +0.1 +0.2 -0.3
mixed community 1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.2 +0.0 -0.3 +0.9
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.4 -0.3 -0.2 +0.3 +1.6
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.3 +0.5 +0.2 -0.2 +0.2
mixed community 1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.1 -0.2 +0.2 +0.7
mixed community 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 +0.2 -0.2 -0.2 +1.8
mixed community M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 +0.2 +0.6 -0.0 +1.0 -0.4
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.3 +0.6 -0.0 +0.2 +0.4
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 +0.6 +0.0 +0.4 +0.6
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +1.2 +0.0 -0.1 +0.6 -0.1
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -0.5 +0.2 -0.1 +2.5
mixed community TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.0 +0.4 +0.2 +0.9
mixed community 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 -0.2 -0.1 -0.2 +0.4 +1.9
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.2 -0.2 +0.2 +0.3 +1.3
carbon source L-Isoleucine (C) +0.3 +0.7 +0.2 +0.4 +0.4
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +0.1 +0.4 +0.2 +1.4 +0.4
mixed community 1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +0.1 +1.3 +0.2 +0.4 +0.7
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