Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_02061 and MPMX20_02062 are separated by 121 nucleotidesMPMX20_02062 and MPMX20_02063 are separated by 94 nucleotidesMPMX20_02063 and MPMX20_02064 are separated by 130 nucleotidesMPMX20_02064 and MPMX20_02065 overlap by 66 nucleotides MPMX20_02061: MPMX20_02061 - Inner membrane transport protein YnfM, at 2,154,527 to 2,155,780 _02061 MPMX20_02062: MPMX20_02062 - Hca operon transcriptional activator HcaR, at 2,155,902 to 2,156,834 _02062 MPMX20_02063: MPMX20_02063 - Protein mlc, at 2,156,929 to 2,158,149 _02063 MPMX20_02064: MPMX20_02064 - ATP-dependent dethiobiotin synthetase BioD 1, at 2,158,280 to 2,158,975 _02064 MPMX20_02065: MPMX20_02065 - Voltage-gated ClC-type chloride channel ClcB, at 2,158,910 to 2,160,220 _02065
Group Condition MPMX20_02061 MPMX20_02062 MPMX20_02063 MPMX20_02064 MPMX20_02065
carbon source L-Asparagine (C) -0.1 -0.1 -4.1 -0.4 -0.1
carbon source Fumarate (C) +0.2 -0.1 -3.8 -0.8 +0.1
carbon source succinate (C) -0.0 +0.3 -4.1 -0.6 +0.1
carbon source L-Proline (C) +0.0 +0.1 -4.4 -0.1 +0.1
carbon source L-Glutamic (C) +0.1 +0.2 -3.6 -0.3 -0.0
carbon source Glucuronamide (C) +0.1 -0.0 -3.2 -0.1 -0.1
carbon source D-Alanine (C) +0.1 +0.0 -3.0 -0.2 -0.0
mixed community 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.3 -0.2 -1.5 -0.4 -0.6
carbon source L-Aspartic Acid (C) -0.0 +0.0 -2.5 -0.5 +0.1
carbon source D-Lactate (C) +0.0 +0.2 -2.2 -0.7 +0.0
carbon source a-Ketoglutaric (C) +0.2 -0.1 -2.0 -0.5 -0.1
carbon source L-Glutamine (C) -0.0 +0.3 -2.3 -0.3 +0.1
carbon source octanoate (C) +0.3 -0.3 -1.3 -1.2 +0.3
carbon source L-Glutamine (C) -0.3 +0.3 -2.0 -0.2 +0.1
carbon source Inosine (C) -0.0 +0.1 -2.3 -0.1 +0.2
carbon source Ethanol (C) +0.1 -0.6 -0.8 -1.0 +0.3
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +0.4 -0.7 -0.8 -0.1
carbon source L-Glutamine (C) +0.1 +0.3 -2.4 +0.1 -0.0
carbon source Uridine (C) -0.2 +0.2 -1.9 +0.4 +0.2
mixed community 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 +1.0 +0.3 -1.4 -0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +0.3 +1.0 -0.6 -1.0
carbon source L-Sorbose (C) +0.4 +0.8 -1.5 +0.4 -0.0
mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 -0.6 -0.5 +1.3 -0.3 +0.2
carbon source D-Mannose (C) -0.3 -0.9 +2.2 -0.3 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.5 -0.0 +3.3 -2.1 +0.4
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.1 -0.1 +2.6 -0.7 -0.1
mixed community M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.5 -0.3 +2.1 +0.4 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -0.4 -0.1 +2.7 -0.5 +0.1
carbon source D-Galactose (C) -0.0 -0.1 +2.4 -0.3 +0.2
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +0.5 +0.2 +2.7 -1.0 +0.1
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