Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01942 and MPMX20_01943 are separated by 313 nucleotidesMPMX20_01943 and MPMX20_01944 are separated by 8 nucleotidesMPMX20_01944 and MPMX20_01945 are separated by 9 nucleotidesMPMX20_01945 and MPMX20_01946 overlap by 26 nucleotides MPMX20_01942: MPMX20_01942 - HTH-type transcriptional repressor BluR, at 2,038,207 to 2,038,935 _01942 MPMX20_01943: MPMX20_01943 - Protein SufA, at 2,039,249 to 2,039,617 _01943 MPMX20_01944: MPMX20_01944 - FeS cluster assembly protein SufB, at 2,039,626 to 2,041,116 _01944 MPMX20_01945: MPMX20_01945 - putative ATP-dependent transporter SufC, at 2,041,126 to 2,041,872 _01945 MPMX20_01946: MPMX20_01946 - FeS cluster assembly protein SufD, at 2,041,847 to 2,043,118 _01946
Group Condition MPMX20_01942 MPMX20_01943 MPMX20_01944 MPMX20_01945 MPMX20_01946
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB -0.2 -0.4 -1.2 -1.5 -1.5
mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 -0.3 -0.5 -1.1 -1.5 -1.3
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB +0.1 -0.1 -1.4 -1.0 -1.4
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 -0.8 -0.7 -0.2 -1.0 -0.7
carbon source succinate (C) -2.9 +0.0 -0.1 -0.1 -0.3
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -1.6 -0.5 -0.1 -0.9 -0.2
supernatant mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB -0.7 -0.3 -0.7 -0.8 -0.8
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.6 -0.3 -0.1 -0.9 -0.2
carbon source Fumarate (C) -2.8 +0.4 -0.1 -0.5 -0.1
carbon source L-Cysteine (C) -2.8 +0.1 -0.1 -0.2 -0.1
nitrogen source L-Aspartic Acid (N) -1.8 +0.0 -0.2 -1.0 -0.0
nitrogen source NAG (N) -2.7 -0.2 +0.0 -0.1 -0.1
nitrogen source Thymidine (N) -3.3 +0.4 +0.2 -0.1 -0.1
mixed community M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090 -1.9 -0.8 -0.2 -0.1 +0.2
nitrogen source L-Asparagine (N) -1.4 -0.6 -0.3 -0.5 +0.0
carbon source butyrate (C) -1.5 -0.8 +0.3 -0.7 +0.1
carbon source L-Histidine (C) -2.8 +0.3 -0.1 +0.0 -0.1
mixed community 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 -1.9 -0.8 -0.2 +0.4 -0.1
nitrogen source Gly-DL-Asp (N) -1.5 +0.1 -0.1 -1.0 -0.2
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -1.9 +0.2 -0.3 -0.4 -0.1
supernatant mutant library grown in Supernatant; Chryseobacterium gleum TBS_030 grown in LB +0.2 -0.7 -0.7 -0.5 -0.7
nitrogen source Parabanic Acid (N) -2.2 -0.3 +0.2 -0.1 +0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -2.7 +0.2 +0.1 -0.1 +0.1
mixed community TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 -1.3 -0.7 +0.3 -0.4 +0.2
nitrogen source Thymine (N) -3.2 +0.8 -0.0 +0.1 +0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -2.7 +0.3 +0.3 +0.2 +0.1
nitrogen source Gelatin (N) -0.9 -1.5 +0.3 +0.5 -0.1
carbon source D-Lactate (C) -2.0 -0.0 +0.3 +0.6 -0.0
mixed community TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.5 -1.2 +0.5 +0.8 -0.3
carbon source D-Galactose (C) +3.6 +0.1 -0.0 -0.1 +0.1
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