Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_01939	MPMX20_01940	MPMX20_01941	MPMX20_01942	MPMX20_01943
mixed community	0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196	-1.0	-0.7	-0.6	-1.9	-0.8
carbon source	Fumarate (C)	-1.4	-0.3	+0.3	-2.8	+0.4
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-1.4	-0.6	+0.6	-2.7	+0.2
carbon source	succinate (C)	-1.0	-0.2	+0.4	-2.9	+0.0
nitrogen source	Thymidine (N)	-0.3	-0.3	+0.1	-3.3	+0.4
nitrogen source	NAG (N)	-0.4	-0.0	-0.2	-2.7	-0.2
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	-1.0	-0.3	+0.3	-2.7	+0.3
nitrogen source	Parabanic Acid (N)	-0.7	-0.2	+0.2	-2.2	-0.3
carbon source	D-Trehalose (C)	-0.4	-0.3	+0.2	-2.6	-0.0
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	-1.6	+0.2	+0.3	-1.8	-0.3
carbon source	L-Histidine (C)	-0.6	-0.2	+0.1	-2.8	+0.3
mixed community	M9 plate, 1:1 coculture with Paenibacillus lautus TBS_090	-1.0	+0.3	+0.3	-1.9	-0.8
mixed community	M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-1.1	-0.2	+0.3	-1.6	-0.3
carbon source	acetate (C)	-0.7	-0.2	+0.2	-2.2	+0.0
carbon source	L-Cysteine (C)	-0.3	-0.3	+0.4	-2.8	+0.1
carbon source	L-Aspartic Acid (C)	-0.8	-0.4	+0.3	-2.1	+0.2
nitrogen source	Thymine (N)	-0.3	-0.6	+0.4	-3.2	+0.8
mixed community	0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.6	-0.5	+0.4	-1.4	-0.5
carbon source	D-Alanine (C)	-0.6	-0.1	+0.5	-2.2	+0.0
carbon source	L-Glutamic (C)	-0.5	-0.2	+0.4	-2.4	+0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.8	-0.9	+0.7	-1.2	-0.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-1.2	-0.3	+1.0	-1.5	-0.3
mixed community	0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-1.1	-0.5	+0.8	-1.9	+0.3
mixed community	0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.9	-0.6	+0.9	-1.3	-0.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.7	-0.4	+1.0	-1.6	-0.5
mixed community	0.1X LB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.9	-0.5	+1.0	-1.6	+0.1
mixed community	1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.9	-0.5	+0.7	-1.1	+0.2
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.7	-0.4	+1.2	-1.5	-0.1
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-1.0	-1.1	+1.7	-1.1	+0.1
carbon source	D-Galactose (C)	-0.3	+0.3	-0.2	+3.6	+0.1