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Protein
Homologs
Fitness for 5 genes in
Enterobacter sp. TBS_079
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX20_01733 and MPMX20_01734 are separated by 141 nucleotides
MPMX20_01734 and MPMX20_01735 are separated by 223 nucleotides
MPMX20_01735 and MPMX20_01736 are separated by 41 nucleotides
MPMX20_01736 and MPMX20_01737 are separated by 1 nucleotides
MPMX20_01733: MPMX20_01733 - Staphyloferrin B transporter, at 1,828,253 to 1,829,482
_01733
MPMX20_01734: MPMX20_01734 - Lipid A biosynthesis lauroyltransferase, at 1,829,624 to 1,830,550
_01734
MPMX20_01735: MPMX20_01735 - hypothetical protein, at 1,830,774 to 1,831,823
_01735
MPMX20_01736: MPMX20_01736 - Protein YceI, at 1,831,865 to 1,832,443
_01736
MPMX20_01737: MPMX20_01737 - Cytochrome b561, at 1,832,445 to 1,833,023
_01737
Group
Condition
MPMX20
_01733
MPMX20
_01734
MPMX20
_01735
MPMX20
_01736
MPMX20
_01737
carbon source
Fumarate (C)
-0.1
-3.9
-0.2
-0.3
-0.1
mixed community
AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001
+0.3
-4.6
-0.1
-0.1
+0.1
mixed community
AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01
-0.2
-4.0
-0.0
+0.1
-0.0
mixed community
AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01
-0.1
-3.9
-0.1
+0.1
+0.0
motility; outer cut
Motility test in 1X LB; 1 day; outer cut; 0.3% agar
-0.0
-3.2
+0.1
-0.5
-0.3
mixed community
AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01
-0.1
-3.8
-0.1
+0.1
-0.0
mixed community
AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01
-0.0
-3.7
-0.1
-0.1
+0.1
mixed community
AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001
+0.3
-3.5
-0.3
-0.2
+0.1
carbon source
succinate (C)
-0.1
-2.7
-0.1
-0.3
-0.2
mixed community
AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001
+0.1
-3.7
-0.1
+0.2
+0.1
carbon source
propionate (C)
-0.7
-1.9
+0.0
-0.8
-0.1
mixed community
AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.01
+0.0
-3.2
-0.1
-0.0
-0.1
carbon source
L-Proline (C)
-0.0
-2.9
+0.2
-0.3
-0.2
mixed community
AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001
-0.2
-2.6
-0.1
+0.0
-0.0
mixed community
AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001
-0.1
-2.6
-0.2
-0.1
+0.1
carbon source
D-Trehalose (C)
-0.1
-2.2
-0.0
-0.2
-0.2
carbon source
D,L-Malic Acid (C)
-0.1
-2.2
-0.1
-0.2
-0.1
motility; outer cut
Motility test in 1X LB; 1 day; outer cut; 0.3% agar
+0.1
-2.5
+0.1
-0.2
-0.2
mixed community
AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01
-0.0
-2.4
-0.0
-0.2
-0.0
mixed community
AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001
-0.2
-2.3
-0.2
+0.1
-0.0
carbon source
L-Malic (C)
+0.1
-2.4
+0.0
-0.1
-0.3
carbon source
L-Glutamic (C)
+0.1
-2.1
-0.0
-0.4
-0.2
carbon source
L-Asparagine (C)
-0.2
-2.1
-0.1
-0.2
-0.1
carbon source
D-Raffinose (C)
+0.2
-2.2
+0.0
-0.4
-0.1
carbon source
D-Lactate (C)
+0.2
-2.3
-0.2
-0.1
-0.0
motility; inner cut
Motility test in 1X LB; 1 day; inner cut; 0.3% agar
-0.2
-2.0
+0.1
-0.1
-0.2
carbon source
D-Alanine (C)
+0.0
-2.1
+0.1
-0.3
-0.1
in planta
Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
+0.1
-0.4
+0.1
-1.0
-1.1
carbon source
L-Aspartic Acid (C)
+0.2
-1.6
-0.1
-0.5
-0.2
in planta
Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
+0.1
-0.6
+0.2
-1.1
-0.7
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