Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01722 and MPMX20_01723 are separated by 766 nucleotidesMPMX20_01723 and MPMX20_01724 are separated by 41 nucleotidesMPMX20_01724 and MPMX20_01725 are separated by 60 nucleotidesMPMX20_01725 and MPMX20_01726 are separated by 159 nucleotides MPMX20_01722: MPMX20_01722 - putative csgAB operon transcriptional regulatory protein, at 1,818,084 to 1,818,734 _01722 MPMX20_01723: MPMX20_01723 - Minor curlin subunit, at 1,819,501 to 1,819,956 _01723 MPMX20_01724: MPMX20_01724 - Major curlin subunit, at 1,819,998 to 1,820,453 _01724 MPMX20_01725: MPMX20_01725 - Curli assembly protein CsgC, at 1,820,514 to 1,820,846 _01725 MPMX20_01726: MPMX20_01726 - putative protein YmdA, at 1,821,006 to 1,821,326 _01726
Group Condition MPMX20_01722 MPMX20_01723 MPMX20_01724 MPMX20_01725 MPMX20_01726
carbon source D-Arabinose (C) -4.5 +0.0 -0.1 -0.6 -0.1
carbon source Cytosine (C) -4.5 -0.5 +0.1 +0.0 -0.1
carbon source Formate (C) -4.5 -0.2 -0.0 -0.0 -0.1
carbon source octanoate (C) -3.4 -0.1 +0.2 -0.5 -0.5
carbon source Glycine (C) -2.8 -0.6 -0.3 -0.2 -0.3
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -2.7 -1.0 -0.4 -0.6 +0.8
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -2.4 -0.7 -0.3 -0.3 +0.2
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 -2.8 -0.5 -0.1 -0.5 +0.3
carbon source Xylitol (C) -2.7 -0.5 -0.1 +0.1 -0.3
mixed community 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 -3.1 -0.2 +0.0 -0.3 +0.2
carbon source D-Salicin (C) -2.6 -0.6 +0.0 -0.1 -0.1
mixed community 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 -2.6 -0.2 -0.0 -0.5 +0.1
carbon source L-Aspartic Acid (C) -2.0 -0.5 -0.2 -0.4 -0.0
carbon source L-tyrosine (C) -1.8 -0.5 -0.1 -0.5 -0.1
carbon source L-Isoleucine (C) -1.8 -0.6 +0.1 -0.3 -0.4
carbon source L-Cysteine (C) -2.2 -0.2 -0.0 -0.1 -0.3
nitrogen source Inosine (N) -2.2 -0.2 -0.0 -0.2 -0.2
carbon source Adenine (C) -2.3 -0.2 -0.1 -0.0 -0.1
carbon source D-Sorbitol (C) -2.5 -0.2 -0.0 -0.0 -0.0
mixed community 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 -2.5 -0.3 -0.0 -0.2 +0.2
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -1.7 -0.6 -0.2 -0.2 -0.2
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 -2.3 -0.3 -0.0 -0.1 -0.0
carbon source Trisodium citrate (C) -2.5 -0.1 -0.0 -0.1 +0.1
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -2.8 +0.1 +0.1 -0.0 +0.2
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -1.3 -0.8 -0.3 -0.2 +0.4
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -2.2 -0.1 -0.2 +0.3 +0.1
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +0.4 +0.1 +0.6 -1.0
carbon source Glycerol (C) +2.0 -0.6 -0.1 +0.3 +0.1
mixed community M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct +2.7 +0.1 -0.0 +0.1 -0.1
mixed community 0.1X LB plate, Mixed culture; Streptomyces tendae SAI_182 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct +3.2 -0.2 +0.1 -0.0 -0.2
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MPMX20_01722
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