Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01615 and MPMX20_01616 are separated by 34 nucleotidesMPMX20_01616 and MPMX20_01617 are separated by 60 nucleotidesMPMX20_01617 and MPMX20_01618 are separated by 175 nucleotidesMPMX20_01618 and MPMX20_01619 are separated by 7 nucleotides MPMX20_01615: MPMX20_01615 - putative protein YccU, at 1,708,286 to 1,708,702 _01615 MPMX20_01616: MPMX20_01616 - Heat shock protein HspQ, at 1,708,737 to 1,709,054 _01616 MPMX20_01617: MPMX20_01617 - Ribosomal RNA large subunit methyltransferase I, at 1,709,115 to 1,710,305 _01617 MPMX20_01618: MPMX20_01618 - hypothetical protein, at 1,710,481 to 1,711,038 _01618 MPMX20_01619: MPMX20_01619 - HTH-type transcriptional activator RhaS, at 1,711,046 to 1,711,837 _01619
Group Condition MPMX20_01615 MPMX20_01616 MPMX20_01617 MPMX20_01618 MPMX20_01619
carbon source L-Fucose (C) +0.2 -4.2 +0.3 -0.3 -0.1
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -0.1 -2.9 -0.3 -0.3 -0.0
mixed community 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 +0.3 -2.9 +0.0 -0.5 -0.3
mixed community M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.9 -2.0 +0.1 +0.1 -0.1
supernatant mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A -0.3 -2.0 +0.0 -0.1 -0.4
mixed community 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -0.0 -3.0 +0.2 +0.3 +0.1
mixed community TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.0 -2.4 +0.3 -0.2 +0.0
nitrogen source butyrate (N) -0.0 -2.3 -0.1 -0.2 +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -1.6 +0.3 +0.1 -0.4
mixed community 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 +0.7 -2.4 +0.0 -0.1 +0.0
carbon source octanoate (C) -1.7 +0.2 +0.3 +0.5 -0.5
carbon source Ethanol (C) +0.4 -1.7 -0.1 -0.1 +0.6
mixed community TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.8 +1.1 -0.2 -0.1 -0.8
mixed community M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 +1.0 -2.8 +0.7 +0.2 +0.0
mixed community M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.6 -0.8 -0.3 +0.9 +1.3
mixed community 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 +0.7 -0.9 +0.7 +0.3 -0.7
mixed community TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.5 -1.7 +0.4 +1.2 +0.1
mixed community M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 +1.4 -1.0 +0.8 -0.0 -0.5
mixed community 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -1.1 +1.1 +0.0 +0.8 -0.2
mixed community 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct -1.0 +0.6 +0.3 +0.3 +0.6
carbon source L-Isoleucine (C) -0.3 +1.8 +0.1 -0.5 -0.2
mixed community 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.7 +1.4 -0.0 -0.0 +0.6
mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 +1.0 +0.5 +0.3 +0.7 -0.4
mixed community TSB plate, 1:1 coculture with AMD2732 +0.8 +1.5 +0.2 +0.0 -0.3
mixed community M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.6 +3.3 +0.1 -0.3 -0.2
mixed community TSB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct -0.1 +2.5 +0.3 +0.1 -0.1
mixed community 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 +0.8 +1.8 +0.1 -0.1 +0.1
mixed community 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 +0.3 +2.8 -0.3 +0.1 +0.2
carbon source L-Malic (C) +0.7 +2.4 -0.2 +0.4 +0.0
carbon source D,L-Malic Acid (C) +1.0 +2.1 +0.1 +0.1 -0.0
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