Fitness for 5 genes in Enterobacter sp. TBS_079

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MPMX20_01427	MPMX20_01428	MPMX20_01429	MPMX20_01430	MPMX20_01431
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5	-0.8	-0.1	-0.1	-2.1	-1.7
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.3	+0.0	+0.0	-2.2	-1.8
in planta	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4	+0.2	-0.1	+0.0	-2.0	-1.3
mixed community	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040	-2.9	-0.2	-0.1	+0.0	+0.1
motility; outer cut	Motility test in 1X LB; 1 day; outer cut; 0.3% agar	-0.4	-0.1	-0.1	-0.8	-0.6
carbon source	D-Alanine (C)	-1.2	+0.1	-0.1	-0.5	-0.3
mixed community	TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090	-1.3	-0.4	+0.2	-0.4	-0.0
carbon source	Adenine (C)	-0.6	+0.2	+0.1	-0.6	-0.7
carbon source	D,L-Malic Acid (C)	-0.8	+0.0	-0.0	-0.6	-0.2
nitrogen source	Carnitine Hydrochloride (N)	-1.8	-0.1	+0.1	+0.1	+0.1
carbon source	L-Asparagine (C)	-0.5	-0.1	-0.1	-0.4	-0.5
mixed community	0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196	-1.0	+0.0	-0.1	-0.2	-0.3
carbon source	L-Sorbose (C)	-0.7	-0.0	+0.1	-0.6	-0.3
carbon source	Glycerol (C)	-0.4	+0.1	-0.1	-0.6	-0.6
carbon source	4-Hydroxybenzoic Acid (C)	-0.7	+0.1	-0.0	-0.6	-0.3
mixed community	TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-1.1	-0.4	+0.0	+0.2	+0.2
carbon source	L-Isoleucine (C)	+0.7	-0.3	-0.0	-0.6	-0.7
carbon source	octanoate (C)	+0.5	-0.0	+0.0	-0.8	-0.4
carbon source	Itaconic Acid (C)	+0.4	-0.1	+0.1	-0.7	-0.5
carbon source	Fumarate (C)	+0.6	-0.1	-0.0	-0.4	-0.6
motility; outer cut	Motility test in 1X LB; 1 day; outer cut; 0.3% agar	+0.6	+0.0	-0.1	-0.6	-0.4
mixed community	0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	-0.9	+0.3	-0.0	+0.2	+0.2
carbon source	D-Lactate (C)	+1.0	+0.1	+0.0	-0.6	-0.5
carbon source	Xylitol (C)	+0.8	+0.2	-0.0	-0.5	-0.3
mixed community	TSB plate, 1:1 coculture with Paraburkholderia pittii CO4	-0.5	+0.7	+0.1	-0.0	+0.3
mixed community	TSB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct	+1.2	-0.4	+0.1	+0.2	+0.0
nitrogen source	butyrate (N)	+1.3	-0.1	+0.2	-0.0	-0.0
mixed community	M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+1.1	+1.0	-0.1	+0.3	-0.2
mixed community	TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+2.5	+0.1	+0.0	+0.2	-0.2
mixed community	TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct	+2.5	-0.1	+0.1	+0.2	+0.7