Fitness for 5 genes in Enterobacter sp. TBS_079

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500 ntMPMX20_01381 and MPMX20_01382 are separated by 61 nucleotidesMPMX20_01382 and MPMX20_01383 are separated by 206 nucleotidesMPMX20_01383 and MPMX20_01384 overlap by 7 nucleotidesMPMX20_01384 and MPMX20_01385 are separated by 3 nucleotides MPMX20_01381: MPMX20_01381 - Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, at 1,443,015 to 1,444,067 _01381 MPMX20_01382: MPMX20_01382 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 1,444,129 to 1,444,881 _01382 MPMX20_01383: MPMX20_01383 - Aldose 1-epimerase, at 1,445,088 to 1,446,131 _01383 MPMX20_01384: MPMX20_01384 - Galactokinase, at 1,446,125 to 1,447,273 _01384 MPMX20_01385: MPMX20_01385 - Galactose-1-phosphate uridylyltransferase, at 1,447,277 to 1,448,323 _01385
Group Condition MPMX20_01381 MPMX20_01382 MPMX20_01383 MPMX20_01384 MPMX20_01385
carbon source D-Galactose (C) +0.3 -1.5 +0.0 -4.9 -5.5
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.2 -2.9 -1.0 -2.2 -1.0
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 +0.2 -2.4 -1.3 -1.0 -2.0
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 +0.2 -1.3 -1.0 -2.1 -0.9
carbon source D-Xyl (C) +0.1 -4.0 -1.4 +0.2 +0.2
carbon source Beta-Lactose (C) +0.8 -0.6 +0.4 -1.7 -3.7
mixed community AMD2036 coinoculated with AMD2590 on RCH2 to a starting OD of 0.001 -0.2 -4.3 -0.4 -0.2 +0.4
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 +0.2 -4.2 -0.0 -0.1 -0.4
carbon source D-Xyl (C) +0.4 -3.9 -0.8 -0.0 -0.0
carbon source D-Glc (C) +0.1 -4.3 +0.1 -0.0 -0.0
carbon source D-Raffinose (C) +0.4 -3.1 +0.3 -0.7 -1.0
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001 +0.5 -3.7 +0.0 -0.3 -0.4
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 +0.3 -3.5 -0.1 -0.3 -0.3
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.01 +0.2 -3.5 +0.1 -0.1 -0.5
carbon source D-Glc (C) -0.0 -4.0 +0.2 +0.1 +0.0
carbon source D-Xyl (C) +0.3 -3.2 -1.0 +0.1 +0.1
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 +0.1 -4.4 +0.1 +0.3 +0.4
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 +0.8 -3.9 -0.1 +0.3 -0.4
supernatant mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in LB +0.4 -3.7 +0.1 -0.1 +0.1
carbon source D-Glc (C) +0.4 -3.6 +0.1 -0.1 -0.1
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -0.2 -3.7 +0.1 +0.4 +0.4
nitrogen source Thymine (N) -0.4 -3.0 +0.4 -0.1 +0.2
nitrogen source D-Alanine (N) -1.0 -2.8 +0.3 +0.3 +0.3
nitrogen source Adenosine (N) -0.6 -2.9 +0.2 -0.0 +0.5
nitrogen source NAG (N) +0.4 -3.0 +0.4 -0.5 +0.1
nitrogen source L-Lysine (N) +0.8 -3.1 +0.1 -0.0 +0.4
nitrogen source Inosine (N) +0.7 -2.9 +0.3 -0.1 +0.2
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 +1.7 -3.0 -0.1 +0.4 -0.1
carbon source D-Lactate (C) -1.4 -1.4 +0.6 +0.6 +0.6
mixed community TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 +2.7 -0.9 -0.1 +0.2 -0.3
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